Gene Aave_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1112 
Symbol 
ID4667886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1217927 
End bp1218592 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content71% 
IMG OID639822309 
ProductGntR family transcriptional regulator 
Protein accessionYP_969481 
Protein GI120609803 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTT CGACCACCAG CGCCATCGTC GCGAGCCTGA CCAAGGCCAT CGTGGAGCAC 
CGGCTGCAGC CCGGCGCCAA ACTGGCCGAG CAGAAGCTGG CGGACCATTT CGGCGTATCG
CGCACCCTGG TGCGGCAGGC GCTCTTCCAG TTGTCGCAGA ACCGGCTCGT CACGCTGGAG
CCCGCGCGCG GCGCCTTCGT GGCAGCGCCA TCGGCCGAGG AGGCGCGGCA GGTGTTCGCC
GTGCGCCGCA TGCTCGAGGC CGAGATGACG CGCGCCTTCG TGCGCGAGGT GACGCCCGCG
CGCATCCGCG CGCTGCGCGA GCACGTGGCC CGCGAGCAGC AGGCGGTCGA GCAGGCCGAC
GTGCCGGGCC GCACCGAGTT GCTGGGCGAC TTCCACGTGC GCATGGCCGA GCTCATGGGC
AACGAGGTGC TCGCGCAATT GCTGGGCGAG TTGATATCGC GCTGCGCGCT CATCACCCTG
ATGTACCAGA GCGCCGCCGA GGCCGCCCAC TCGCACGAAG AGCACGGCCA CATCGTGAAG
GCGCTGGCCG ACCGCGATGC CGACCTGGCC GTGCGCCTGA TGGACGAGCA TCTGCGCCAC
GTGGAGGCCA GCCTGGCCTT CGACCGCGCG CATCCGCCCA ACGAACTCTC CCGCGCCCTG
TCCTGA
 
Protein sequence
METSTTSAIV ASLTKAIVEH RLQPGAKLAE QKLADHFGVS RTLVRQALFQ LSQNRLVTLE 
PARGAFVAAP SAEEARQVFA VRRMLEAEMT RAFVREVTPA RIRALREHVA REQQAVEQAD
VPGRTELLGD FHVRMAELMG NEVLAQLLGE LISRCALITL MYQSAAEAAH SHEEHGHIVK
ALADRDADLA VRLMDEHLRH VEASLAFDRA HPPNELSRAL S