Gene Aave_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_1099 
Symbol 
ID4666443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp1205039 
End bp1205734 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content73% 
IMG OID639822297 
ProductGntR family transcriptional regulator 
Protein accessionYP_969469 
Protein GI120609791 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.322979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCA GCCAGAGCCA GATCGCACAG CAGGTCGTCG AATCCATCCT GGCGCAGAAG 
CTGGCGCCCG GCGAACGGCT GGGCGAGCAG GACCTGGCCG ACCTGTTCGG CGTCAGCCGC
ACCATGGTGC GGGAAGCGCT GATGCAACTG CAGGCCCGCG GTTTCGTCGA GGTGCGCGCG
CGGCGCGGCT GGTACGTGGT GGAGCCGTCG GTGGAGGATG CGCGCGACGC CTTCTCCGCG
CGCCGCATCA TCGAATCCGG CATCCTGGCC GACGCCGGCC GGCCGCTGCA GCAGACCGTG
GTGCCGCGCC TGCGCGCGCA CATCGACGAG GAGCGGCGCG CGATCGAAGG CGCGGATGCC
GCGACGCGCG CCTTCCTGCT GGCCGATTTC CACGTCTGCC TGGCCGAGGC GCTGGGCCAC
CGCACGCTCA GCGACCTGCT GCGCGACCTC ACGGCCCGCA CCACGCTGGC CGCGTCGCTC
TACCAGTCGC AGCACGGCGC CAGCCAGTCC TGCGCGGAAC ACGCGGCCAT CGTCGAGGCA
CTGGAATCCG GCGACACCGC CCTGGCCCGG GAGCGCATGC TGGCGCACAT CGGCCACGTG
GAGGACGCGC TCGACCCGGA CCAGCCCCTG GTGCGCGACC GGCTGCGCGA ATCGCTCGCC
CCCCTGTCCG CGGCGGCCCG GCCCGCGGCG GACTGA
 
Protein sequence
MGISQSQIAQ QVVESILAQK LAPGERLGEQ DLADLFGVSR TMVREALMQL QARGFVEVRA 
RRGWYVVEPS VEDARDAFSA RRIIESGILA DAGRPLQQTV VPRLRAHIDE ERRAIEGADA
ATRAFLLADF HVCLAEALGH RTLSDLLRDL TARTTLAASL YQSQHGASQS CAEHAAIVEA
LESGDTALAR ERMLAHIGHV EDALDPDQPL VRDRLRESLA PLSAAARPAA D