Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_1099 |
Symbol | |
ID | 4666443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 1205039 |
End bp | 1205734 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639822297 |
Product | GntR family transcriptional regulator |
Protein accession | YP_969469 |
Protein GI | 120609791 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.322979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCA GCCAGAGCCA GATCGCACAG CAGGTCGTCG AATCCATCCT GGCGCAGAAG CTGGCGCCCG GCGAACGGCT GGGCGAGCAG GACCTGGCCG ACCTGTTCGG CGTCAGCCGC ACCATGGTGC GGGAAGCGCT GATGCAACTG CAGGCCCGCG GTTTCGTCGA GGTGCGCGCG CGGCGCGGCT GGTACGTGGT GGAGCCGTCG GTGGAGGATG CGCGCGACGC CTTCTCCGCG CGCCGCATCA TCGAATCCGG CATCCTGGCC GACGCCGGCC GGCCGCTGCA GCAGACCGTG GTGCCGCGCC TGCGCGCGCA CATCGACGAG GAGCGGCGCG CGATCGAAGG CGCGGATGCC GCGACGCGCG CCTTCCTGCT GGCCGATTTC CACGTCTGCC TGGCCGAGGC GCTGGGCCAC CGCACGCTCA GCGACCTGCT GCGCGACCTC ACGGCCCGCA CCACGCTGGC CGCGTCGCTC TACCAGTCGC AGCACGGCGC CAGCCAGTCC TGCGCGGAAC ACGCGGCCAT CGTCGAGGCA CTGGAATCCG GCGACACCGC CCTGGCCCGG GAGCGCATGC TGGCGCACAT CGGCCACGTG GAGGACGCGC TCGACCCGGA CCAGCCCCTG GTGCGCGACC GGCTGCGCGA ATCGCTCGCC CCCCTGTCCG CGGCGGCCCG GCCCGCGGCG GACTGA
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Protein sequence | MGISQSQIAQ QVVESILAQK LAPGERLGEQ DLADLFGVSR TMVREALMQL QARGFVEVRA RRGWYVVEPS VEDARDAFSA RRIIESGILA DAGRPLQQTV VPRLRAHIDE ERRAIEGADA ATRAFLLADF HVCLAEALGH RTLSDLLRDL TARTTLAASL YQSQHGASQS CAEHAAIVEA LESGDTALAR ERMLAHIGHV EDALDPDQPL VRDRLRESLA PLSAAARPAA D
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