| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0970 |
|---|
| Symbol | |
|---|
| ID | 4665866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 1065092 |
|---|
| End bp | 1066354 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639822170 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_969342 |
|---|
| Protein GI | 120609664 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA CCACCACCGA CAAGACCGAC ATCCGCCAGC TGCGCGTGAA TGGCGAGCGC
CTCTGGGATT CGCTCATGGA ACTCGCGCAG ATCGGCGCCA CGCCCAAGGG CGGCGTCTGC
CGCCTCACGC TCACCGACCT GGACAAGCAG GGCCGCGACC TCGTCACGCG CTGGGCGCGC
GAGGCGGGCA TGTCCGTCAC CATCGACAAG ATCGGCAACG TCTTCATGCG CCGCCCGGGC
CGCGACGACA GCCTGCCGCC CATCATGACC GGCAGCCACA TCGACACCCA GCCCACGGGC
GGCAAGTTCG ACGGAAACTA CGGCGTGCTG GCCGGCATCG AGGTGGTGCG CACGCTCAAT
GACCATGGCA TCGAGACCGA GGCGCCCATC GAGGTCGCCT TCTGGACCAA CGAGGAAGGC
AGCCGCTTCG TGCCCGTGAT GATGGGCTCG GGCGTGTTCG CCAAGGCCTT CACGCTGGAA
CATGCCTATG CTGCCACCGA TACCGAGGGC AAGACCGTGA AGGGCGAGCT GGAGCGCATC
GGCTACATCG GCGACCAGGA GCCCGGCGAC CATCCCATCG GCGCGTATTT CGAGACCCAC
ATCGAGCAGG GCCCGGTGCT GGAAGACCAC GGCAAGACCA TCGGCGTGGT GACGGGCGTG
CTCGGCATCC GCTGGTACGA CTGCACCGTG ACAGGCATGG AGGCGCACGC CGGCCCGACG
CCCATGGCCC TGCGCCGCGA TGCCCTGCAG GTGGCCACTC GGCTCATGCA GGAGGTGGTG
GCCTGCGCGC ACCGCCATCC GCCGCATGGC CGCGGCACGG TGGGCATGGT GCATGTGCAC
CCCAACAGCC GCAACGTGAT CCCGGGGCAG GTCAAGTTCA GCATCGACCT GCGCAACGCC
ACCGACGCCG AGTGCGACAG CATGGACCAG GACATCCGCG CCGTGGCCGC CCGGCTCTCG
CAGGAAACGG GGCTGCCCAT CCAGATCGAC CTGGTTTCCA ATTATCCCGC CCAGCCGTTC
CATGCCGAGT GCGTGGAGGC CGTGGGCCGC GCAGCGGAGC GACTGGGCTA TTCCCACATG
CCCGCGGTGT CCGGCGCCGG CCACGATGCC GTGTACATGG CGCGCCTGGC GCCGGCCGGC
ATGATCTTCA TCCCGTGCAA GGACGGCATC AGCCACAACG AGATCGAGGA TGCCCAGCCC
GGGCACATCA CCGCCGGCTG CAACGTGCTG CTGCACGCGA TGCTGGAACG GGCCGGCACC
TGA
|
|---|
| Protein sequence | MDTTTTDKTD IRQLRVNGER LWDSLMELAQ IGATPKGGVC RLTLTDLDKQ GRDLVTRWAR
EAGMSVTIDK IGNVFMRRPG RDDSLPPIMT GSHIDTQPTG GKFDGNYGVL AGIEVVRTLN
DHGIETEAPI EVAFWTNEEG SRFVPVMMGS GVFAKAFTLE HAYAATDTEG KTVKGELERI
GYIGDQEPGD HPIGAYFETH IEQGPVLEDH GKTIGVVTGV LGIRWYDCTV TGMEAHAGPT
PMALRRDALQ VATRLMQEVV ACAHRHPPHG RGTVGMVHVH PNSRNVIPGQ VKFSIDLRNA
TDAECDSMDQ DIRAVAARLS QETGLPIQID LVSNYPAQPF HAECVEAVGR AAERLGYSHM
PAVSGAGHDA VYMARLAPAG MIFIPCKDGI SHNEIEDAQP GHITAGCNVL LHAMLERAGT
|
|---|
| |