| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0936 |
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| Symbol | |
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| ID | 4666079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 1017943 |
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| End bp | 1019523 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639822136 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_969308 |
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| Protein GI | 120609630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCC CACGCACGGC ATTGCGCGCC GCCTTCGGCG CCTCCCTGAT CGCGGCGGCC
TGCATGGCGG GCGCGCAGAC CATCCGGGTC GCCAACCAGG GCGACGCGCT GTCGATGGAT
CCGCATTCCC TGAACGAGAG CCTGCAGCTC AGCGTGACCG GCAATATCTA TGAGCCGCTC
GTGGGCCGCA ACAAGGACCT GAGCCTGGCG CCGGCGCTGG CCACGCGCTG GGCACAGCTC
TCTCCCACGG TGTGGCGCTT CGAACTGCGG CGTGGCGTGC TTTTCCACGA CGGCACTCCG
TTCACCGCGG ACGACGTGCT GTTTTCGCTG GCACGCACGC AGGCCGGGAG TTCGGACATG
AAGACGTACA CCAACGACTT CAAGGAAGTG CGCAAGGTGG ACGACTACAC CGTCGAGATC
GAGACCAAAG CTCCGTACCC CATCCTGCCC GATGTGCTCA CGCTCGTGTA CATGATGTCG
CGCAAGTGGT GCGAGACGAA CCACGCCACG GAGCCGGTGG ATCGGCGCAG GGGCGTGGAG
AACGCGGCGT CGTTCCGGGC CAACGGCACG GGGCCGTTCC GGCTGCGCGA GCGCCAGCCC
GGCGTGCGTA CCGTGTTCAC GCGCAACGCG CAGTACTGGG GGGCCATCGA AGGCAACGTG
TCCGAGGTGG TGTTCACCCC CATCGGCAAC GACGCCACCC GCGTCGCGGC GCTGCTGTCG
GGCCAGGTGG ACGTCATGGA GCCCGTGCCG GTGCAGGACA TCGAGCGCGT GAACACGAGT
CCGCTCACGC GCGCAGTGAC CGGGCCCGAG CTGCGCACCA TCTTCCTGGG CATGGACCAG
AAGCGCGACG AGCTGCTGTA TTCCAGCGTG AAGGGCAAAA ACCCGTTCAA GGACAAGCGC
GTGCGCCAGG CCTTCTACCA GGCCATCGAC ATCGAGGGCA TCCGCAAGAC GGTGATGCGC
GGCGCCTCCA ATCCGTCGGC GCTGCTGGTG GGGCCGGGCG TGAACGGTTT CCAGGCGGAT
ATCAAGCGCC TTCCCTACGA CACGGATGCC GCGAAGAAGC TGCTGGCCGA AGCCGGCTAC
CCCAACGGCT TCGAGGTGGG CATGAACTGC CCCAACGACC GCTACGTGAA TGACGCGCGC
ATCTGCCAGG CAGTGGCCGC CAACCTCGCG CGCATCGGCG TGAAGGTGAA CCTGCAGGCG
GAAACCAAGG GCACGTACTT CCCCAGGGTG CTGCGGCGGG ATACCAGCTT CTACATGCTG
GGCTGGATGC CCGCCACCTA CGACGCGCAC AACGCGATGA CTGCGCTGAT GGCCTGCGTG
GACGACAAGG GCGCCGGGCA GTTCAACCTG GGCGGGTACT GCAATCCCAA GGTGGACCAG
CTCACGCGGC AGGTGCAGTC GGAGGTCGAC AAGGCCCGGC GCGACGCGAT GATCCGCGAA
GCCTTCGAGA TCCATGCGGC CGACGTGGGC CACATCCCGC TGCACCAGCA GGCCCTGGCC
TGGGGCGTGT CGCGCAAGGT GGCGCTGGTG CAGATGGCCG ACAACTTCAT GCCGTTCAAG
TGGATGAGCC TCGCGAAGTG A
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| Protein sequence | MNFPRTALRA AFGASLIAAA CMAGAQTIRV ANQGDALSMD PHSLNESLQL SVTGNIYEPL
VGRNKDLSLA PALATRWAQL SPTVWRFELR RGVLFHDGTP FTADDVLFSL ARTQAGSSDM
KTYTNDFKEV RKVDDYTVEI ETKAPYPILP DVLTLVYMMS RKWCETNHAT EPVDRRRGVE
NAASFRANGT GPFRLRERQP GVRTVFTRNA QYWGAIEGNV SEVVFTPIGN DATRVAALLS
GQVDVMEPVP VQDIERVNTS PLTRAVTGPE LRTIFLGMDQ KRDELLYSSV KGKNPFKDKR
VRQAFYQAID IEGIRKTVMR GASNPSALLV GPGVNGFQAD IKRLPYDTDA AKKLLAEAGY
PNGFEVGMNC PNDRYVNDAR ICQAVAANLA RIGVKVNLQA ETKGTYFPRV LRRDTSFYML
GWMPATYDAH NAMTALMACV DDKGAGQFNL GGYCNPKVDQ LTRQVQSEVD KARRDAMIRE
AFEIHAADVG HIPLHQQALA WGVSRKVALV QMADNFMPFK WMSLAK
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