| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0929 |
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| Symbol | |
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| ID | 4665679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 1009793 |
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| End bp | 1011376 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639822129 |
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| Product | threonine dehydratase |
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| Protein accession | YP_969301 |
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| Protein GI | 120609623 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.767774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA CCTCCCCCCC TGCCCTGACA CCCGCCGACT ACCTCAAGAA GATCCTGACG
GCGCGCGTGT ACGACGTGGC CGTCGAGTCG GCACTGGAGC CCGCGCGCGC GCTGGGCCGC
CGGCTGCACA ACACGGTGCT GCTCAAGCGC GAGGACCAGC AGCCCGTGTT CAGCTTCAAG
CTGCGGGGTG CCTACAACAA GATGGCGCAC CTGTCTGCCG AGCAGTTGCA GCGCGGCGTG
ATCTGCGCCT CGGCCGGCAA CCATGCGCAG GGCGTGGCCA TGAGCGCCAA GCGCCTGGGC
ACGCGTGCGG TGGTGGTGAT GCCCACGACC ACGCCGCAGC TCAAGGTGGA CGCCGTGAAG
ACGCTGGGCG GCGAGGTCGT GCTGCACGGG GACAGCTACT CCGACGCCTA CGAGCACGCC
GCGCGCCTGC AGCAGGAGCA GGGCCTGACC TTCGTGCATC CGTTCGACGA TCCGGACGTG
ATCGCCGGAC AGGGCACCAT CGCCATGGAA ATCCTGCGCC AGCTGCAGAG CCTGGGCAGC
AATCGGCTGG ACGCGGTGTT CGTGGCGATC GGCGGCGGCG GCCTGGTGAG CGGGGTGGCC
AACTACATCA AGGCCGTGCG GCCGGAGATC CGCATCGTCG GCGTGCAGAT GAACGATTCC
GACGCCATGG CACGCTCGGT CGCGTCCGGC AGCCGCGTGG CGCTCCCCGA CGTGGGGCTG
TTTTCGGACG GCACGGCCGT GAAGCTGGTG GGCGAGGAGA CCTTCCGCGT CGCGAGCGGG
CTGGTGGACG AGTTCATCAC GGTGGACACC GACGCCGTCT GCGCGGCGAT CAAGGACATC
TTCGTGGACA CGCGCAGCAT CGTGGAGCCC GCCGGGGCCC TGGCGGTGGC GGCCATCAAG
CAGTACGTGG CCCAACACAA GACCCGCGGG GAAACGTACG CCGCCATCCT GTGCGGCGCC
AACATGAATT TCGACCGCCT GCGCTTCGTC GCGGAGCGTG CCGAAGTGGG CGAAGAGCGC
GAGGCGCTGC TGGCGGTGAC GATCCCCGAG GAGCGCGGGA GCTTCCGGCG CTTCTGCGAG
GTGGTCGGCC AGTTGCCCGG CGGCCCCCGC AACGTGACGG AGTTCAACTA CCGCATCAGC
GATGCGTCGC GAGCCCACGT CTTCGTCGGG CTGACCACGC ATGGCAAGGG CGAGTCGGAG
AAGATCGCGC GCAACTTCCA GCGCCATGGG TTCGAGGCGC TGGACCTCAC GCACGACGAA
CTGACCAAGG AGCACCTGCG GCACCTCGTG GGCGGCCGCT CCGGGCTCGC CCAGGACGAG
CGGCTGCTGC GCATCATCTT CCCGGAGCGC CCGGGCGCGC TCTTCAAGTT CCTGAGCATG
ATGCAGCCAA GCTGGAACAT CAGCCTCTTC CACTACCGCA ACCAGGGGGC GGACTACGGC
CGCATCCTCG TGGGCATGCA GGTGCCGGCG GGCGACGCAC AGGCCTTCGA GGCCTTCCTG
CAGACGCTGG GCTACCCCTA CGTGGAAGAA ACGCAGAACC CCGCGTACCG GCTGTTCCTG
CAGGCGCCCG CGGGCCGGGG CTGA
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| Protein sequence | MTKTSPPALT PADYLKKILT ARVYDVAVES ALEPARALGR RLHNTVLLKR EDQQPVFSFK
LRGAYNKMAH LSAEQLQRGV ICASAGNHAQ GVAMSAKRLG TRAVVVMPTT TPQLKVDAVK
TLGGEVVLHG DSYSDAYEHA ARLQQEQGLT FVHPFDDPDV IAGQGTIAME ILRQLQSLGS
NRLDAVFVAI GGGGLVSGVA NYIKAVRPEI RIVGVQMNDS DAMARSVASG SRVALPDVGL
FSDGTAVKLV GEETFRVASG LVDEFITVDT DAVCAAIKDI FVDTRSIVEP AGALAVAAIK
QYVAQHKTRG ETYAAILCGA NMNFDRLRFV AERAEVGEER EALLAVTIPE ERGSFRRFCE
VVGQLPGGPR NVTEFNYRIS DASRAHVFVG LTTHGKGESE KIARNFQRHG FEALDLTHDE
LTKEHLRHLV GGRSGLAQDE RLLRIIFPER PGALFKFLSM MQPSWNISLF HYRNQGADYG
RILVGMQVPA GDAQAFEAFL QTLGYPYVEE TQNPAYRLFL QAPAGRG
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