| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0912 |
|---|
| Symbol | |
|---|
| ID | 4666796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 993726 |
|---|
| End bp | 994463 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639822112 |
|---|
| Product | lyso-ornithine lipid acyltransferase |
|---|
| Protein accession | YP_969284 |
|---|
| Protein GI | 120609606 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.427202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGC TGCGCGCGGT GGCGCGCCTG ATGCGGCTCC TGGCGCACAT CCTGGCGGGG
CTGGCCACGG TGCTGCTGCG CTTCCCCCGC ATGGGGCCGG ACGAGCAGCA TGCGCGCGTG
CAGGCCTGGT CGCGCATGCT GCTCGCGCAC ATCGGCATCG ACCTGGAGGT ACGGGGCACC
CCGCCAGCGG CCGGGCCGGT GCTCCTGGTG GCCAACCACC TGTCCTGGCT CGACATCACC
GTCATGCACG CCGCGCGGCA CTGCCGCTTC ATCTCGAAAT CGGACGTGGA GCGCTGGCCC
GTCATCGGCC GGCTCGCCAC GGCCGCGGGC ACCCTCTACA TCGAGCGCAA CACGCGCCGC
GATGCCATGC GCATCGTGCG CCTCATGCAG GAGGCGCTGG CGCGCCGCGA GGTGCTGGGC
GTGTTCCCCG AAGGAACGAC GGGCGACGGC GCCGAGCTGC TGCCGTTCCA TGCGAATCTC
CTGCAGGCGG CGGTGATGGC CGATGCGCCG GTGCAGCCCG TGGGCCTGCG CTTCATCGAC
CGCGCCACGG GCCGGCCCAG CGCGGCCGCC CTCTACGTGG GCGACGACAC CCTGGTGCAC
TCGCTCTGGC GCGTGCTGTG CGCCGACGGC CTGGTGGCCA TCGTGCACTA CGGGCCGCCC
CAGCATGCAG CGGGCCGCGA CCGGCGCGCG TGGGCGGAAG ACCTCCGGCA GGCCGTGGAC
GCGCTGCGGC GGACCTGA
|
|---|
| Protein sequence | MRSLRAVARL MRLLAHILAG LATVLLRFPR MGPDEQHARV QAWSRMLLAH IGIDLEVRGT
PPAAGPVLLV ANHLSWLDIT VMHAARHCRF ISKSDVERWP VIGRLATAAG TLYIERNTRR
DAMRIVRLMQ EALARREVLG VFPEGTTGDG AELLPFHANL LQAAVMADAP VQPVGLRFID
RATGRPSAAA LYVGDDTLVH SLWRVLCADG LVAIVHYGPP QHAAGRDRRA WAEDLRQAVD
ALRRT
|
|---|
| |