Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0882 |
Symbol | |
ID | 4667943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 958241 |
End bp | 959020 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639822082 |
Product | short chain enoyl-CoA hydratase |
Protein accession | YP_969254 |
Protein GI | 120609576 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.533532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCTACG AAGTCATCGA GGTCCGCACC GAGGCGGACA AGGTCGGCGT CATCACGCTG AACCGCCCCA AGCAGCTCAA CGCGCTCAAC GACCAGCTCA TGGACGAGCT GGGCGACGCG CTGGCCGCCT TCGATGCCGA CGAACGCATC GGCTGCATCA TCCTCACCGG CAGTGAAAAG GCCTTCGCGG CGGGCGCGGA CATCGGCGCG ATGGCCAAGT ACGGCTTCGC CGACGCCTAC AAGGGCGACT ACATCACGCG CAACTGGGAA CGCATCCGCT CCATCCGCAA GCCGGTGATC GCGGCCGTGA GCGGCTTCGC GCTGGGCGGC GGCTGCGAGC TGGCGATGAT GTGCGACTTC ATCATCGCCG CCGACAACGC GAAGTTCGGC CAGCCCGAGA TCAAGCTCGG CGTGATTCCG GGCGCGGGCG GCACGCAGCG CCTGCCGCGC GCCGTGGGCA AGTCCAAGGC CATGGACATG GCCCTCACCG CCCGCATGAT GGATGCGCAG GAGGCCGAGC GTGCCGGCCT GGTGAGCCGC GTCGTGCCCT ACGACAAGCT CATGGACGAA GCCCTGGGCG CGGCCCTGGT GATCGCCGGC TTCTCGCAGG TGGCCGTCAT GGCGGCCAAG GAAACCGTCA ACCGCGCCTT CGAGGGGGCG CTCTCCGACG GCCTCATGTA CGAGCGCCGC CTGTTCCACG CGCTGTTCGC CACGCAGGAC CAGAAGGAAG GCATGGCCGC CTTCCTGGAA AAGCGCCCGG CGGTGTTCAC GCACCGCTGA
|
Protein sequence | MAYEVIEVRT EADKVGVITL NRPKQLNALN DQLMDELGDA LAAFDADERI GCIILTGSEK AFAAGADIGA MAKYGFADAY KGDYITRNWE RIRSIRKPVI AAVSGFALGG GCELAMMCDF IIAADNAKFG QPEIKLGVIP GAGGTQRLPR AVGKSKAMDM ALTARMMDAQ EAERAGLVSR VVPYDKLMDE ALGAALVIAG FSQVAVMAAK ETVNRAFEGA LSDGLMYERR LFHALFATQD QKEGMAAFLE KRPAVFTHR
|
| |