Gene Aave_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0864 
Symbol 
ID4667647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp935488 
End bp938439 
Gene Length2952 bp 
Protein Length983 aa 
Translation table11 
GC content68% 
IMG OID639822063 
Productribonucleotide-diphosphate reductase subunit alpha 
Protein accessionYP_969236 
Protein GI120609558 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0575744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTG CGCTGAGCCC TTCATCCGCC ACGACCGCAC CCGACCAGAC GCCCACGGCG 
CAGGGCACCG AGCCCGCGGC CGGCGGCCAT CCGCTCTCGC ACTACCAGAT CATCCGCCGC
AACGGCGCGG TCGTGCCGTT CGAGCCGCAG AAGATCGCCG TGGCCATGAT GAAGGCCTTC
CTGGCGGTGC ACGGCACCCA GGGCGCGGCC TCGGCCAGCG TGCGCGAGAC GGTGGACACC
CTGACCCAGT CCGTGGTGCG CGCGCTCATG CGCTCGCGCC CGGGCGGTGG CACGTTCCAC
ATCGAGGACG TGCAGGACAA CGTGGAACTG AGCCTCATGC GCGGCGGCCA CCACGAAGTG
GCCCGTGCCT ACGTGCTCTA CCGCGAGCGC CGCACCCAGG AGCGCGCGCA CCAGCAGCAC
GACCGCCAGC CCGTGCCCTC CACGCCGGTG CTGCACGTGA TCGACAACGG CCAGCGCGTG
CCGCTCGACG AGGCCCGCCT GCGCGGCCTG ATCGACTCCG CCTGCGCCAA CCTGGGCGCA
GACGTGCACG CCGCGCCCAT CGTGGCCGAG ACGCTGCGCA ACCTGTATGA CGGCGTTCCG
ATGGACGAGG TGTACAAGGC CTCCATCTTG GCCGCGCGCA CGCTGATCGA GAAGGACCCG
GACTACACCT ACGCCACCGC CCGCCTGCTG CTGCACACCA TCGTGCGCGA GGTGCTGGGC
CAGGACGTGG TGCCCGCCGA CATGGGCCCG GCCTACGCCG CCTACTTCCC GCAGTTCATC
CAGAAGGGCG TGGACAACGA ACTGCTCGAT CCCCGCCTGC TGCAGTACGA CCTGGTCCGC
CTGGGTGCCG CGCTCGATGC CGGCCGCGAC CAGCAGTTCG ACTACCTGGG CCTGCAGACC
CTGTACGACC GCTACTTCCT GCACGTGCGC AAGACGCGCA TCGAGCTGCC CCAGTGCTTC
TTCATGCGCG TGGCCATGGG CCTGGCGCTG AACGAGCCCG ACCGCGAGGC CCGTGCCATC
GAGTTCTACG AGGTGCTGTC GTCGTTCGAC TTCATGTCGA GCACGCCCAC GCTCTTCAAC
AGCGGCACGC TGCGCTCGCA ACTCTCGTCC TGCTACCTCA CCACGGTGCC AGACGACCTC
GACGGCATCT ACGAATCCAT CAAGGAAAAC GCCCTGCTCT CCAAGTTCGC GGGCGGCCTG
GGCAACGACT GGACGCGCGT GCGCGCGCTC GGCTCGCACA TCAAGGGCAC GAACGGCGAA
TCGCAGGGCG TGGTGCCGTT CCTCAAGGTG GTGAACGACA CGGCCGTGGC CGTGAACCAG
GGCGGCAAGC GCAAGGGCGC CGTCTGCACC TACCTGGAAA CCTGGCACCT CGACATCGAG
GAATTCCTGG AGCTGCGCAA GAACACCGGC GACGACCGCC GCCGCACGCA CGACATGAAC
ACGGCCAACT GGATCCCCGA CCTGTTCATG CGCCGCGTGA TGGAAAAGGG CACCTGGACG
CTGTTCTCGC CCTCCTCCGT GCCGGACCTG CACGACCTGT TCGGCGCCGA CTTCGAGAAG
GCCTACGTCG CCTACGAAGA AAAGGCCGCG CGCGGCGAGA TCAAGCCCTC GCGCACCGTG
CAGGCCACCG ACCTGTGGCG CAAGATCCTC ACGATGCTGT TCGAGACCGG CCACCCCTGG
ATCACGTTCA AGGACGCCTG CAACGTGCGC TCGCCCCAGC AGCACGCCGG CGTGGTGCAT
TCGTCCAACC TCTGCACCGA GATCACGCTC AACACCAGCG ACGCTGAAAC CGCCGTGTGC
AACCTCGGCT CGGTGAACCT CGTGCGCCAC CTGAAGGACG GCCCGAACGG CAAGGAGCTC
GACCACGCCA AGCTGCGCAA GACCATCTCC ACGGCCATGC GCATGCTCGA CAACGTGATC
GACATCAACT ACTACGCGGT CGAGAAGGCG CGCAACTCCA ACATGCGCCA CCGCCCGGTG
GGCCTGGGCC TGATGGCCTT CCAGGACAGC CTGTACGAGC TGCGCATTCC CTACGCCTCG
CAGGCCGCGG TGGAATTCGC CGACCGCTCG ATGGAAGCGA TCTGCTACTA CGCCTACTGG
GCCTCCACCG AGCTCGCCCA GGAACGCGGC AAGTACTCCA GCTACCCCGG CTCGCTGTGG
GACCGCGGCA TCCTGCCGAT CGACACGCTC GACCTGCTGG AGAAGGCCCG CGGCGGCTAC
GTGGAAGTGG ACCGCGCCGC CACGCTCGAC TGGGACGCGC TGCGCCAGAA GATCGCCCGC
GACGGCATGC GCAACTCCAA CTGCGTGGCC ATCGCGCCCA CGGCCACCAT CTCCAACATC
GTCGGCGTGG ATGCGTCGAT CGAACCGTCC TTCGGCAACC TGTCGGTCAA GTCGAACCTG
TCGGGCGAGT TCACCGTCAT CAACGGCTAC CTCGTGCGCG ACCTCAAGCG CCTGGGCCTG
TGGGACGACG TGATGGTCAT GGACCTCAAG CACTTCAAGG GCTCGCTGCA CCCGATCGAC
CGCGTGCCGC AGGACGTGAA GGCGCTGTAC TCCACCGCCT TTGAAGTGGC GCCCACGTGG
CTGGTGGAAG CCGCGTCGCG CCGCCAGAAG TGGATCGACC AGGCGCAGAG CCTGAACATC
TACATGGCCG GCGCCTCCGG CAAGAAGCTC GACGAGACCT ACAAGCTCGC CTGGGTGCGC
GGCCTCAAGA CCACGTACTA CCTGCGCACG CAGAGCGCGA CGCACGTCGA GATGAGCACC
GTGAACACGC GCCAGCTCAA CGCCGTTTCG TCGGGCAGCG ACAGCGCGAT GCAGGCCGCC
GGCACCGGCG CCGCGCGCCC CAGCGCGCTC GATGCGGCCG CCGCCGCGGC GCAGTCGCAG
GCCGCCGCAT TGCCCGCGAC CGACGTGAAG TTCTGCGCCA TCGACGACCC CACCTGCGAA
GCCTGCCAGT GA
 
Protein sequence
MQPALSPSSA TTAPDQTPTA QGTEPAAGGH PLSHYQIIRR NGAVVPFEPQ KIAVAMMKAF 
LAVHGTQGAA SASVRETVDT LTQSVVRALM RSRPGGGTFH IEDVQDNVEL SLMRGGHHEV
ARAYVLYRER RTQERAHQQH DRQPVPSTPV LHVIDNGQRV PLDEARLRGL IDSACANLGA
DVHAAPIVAE TLRNLYDGVP MDEVYKASIL AARTLIEKDP DYTYATARLL LHTIVREVLG
QDVVPADMGP AYAAYFPQFI QKGVDNELLD PRLLQYDLVR LGAALDAGRD QQFDYLGLQT
LYDRYFLHVR KTRIELPQCF FMRVAMGLAL NEPDREARAI EFYEVLSSFD FMSSTPTLFN
SGTLRSQLSS CYLTTVPDDL DGIYESIKEN ALLSKFAGGL GNDWTRVRAL GSHIKGTNGE
SQGVVPFLKV VNDTAVAVNQ GGKRKGAVCT YLETWHLDIE EFLELRKNTG DDRRRTHDMN
TANWIPDLFM RRVMEKGTWT LFSPSSVPDL HDLFGADFEK AYVAYEEKAA RGEIKPSRTV
QATDLWRKIL TMLFETGHPW ITFKDACNVR SPQQHAGVVH SSNLCTEITL NTSDAETAVC
NLGSVNLVRH LKDGPNGKEL DHAKLRKTIS TAMRMLDNVI DINYYAVEKA RNSNMRHRPV
GLGLMAFQDS LYELRIPYAS QAAVEFADRS MEAICYYAYW ASTELAQERG KYSSYPGSLW
DRGILPIDTL DLLEKARGGY VEVDRAATLD WDALRQKIAR DGMRNSNCVA IAPTATISNI
VGVDASIEPS FGNLSVKSNL SGEFTVINGY LVRDLKRLGL WDDVMVMDLK HFKGSLHPID
RVPQDVKALY STAFEVAPTW LVEAASRRQK WIDQAQSLNI YMAGASGKKL DETYKLAWVR
GLKTTYYLRT QSATHVEMST VNTRQLNAVS SGSDSAMQAA GTGAARPSAL DAAAAAAQSQ
AAALPATDVK FCAIDDPTCE ACQ