| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0793 |
|---|
| Symbol | |
|---|
| ID | 4669699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 853968 |
|---|
| End bp | 855638 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639821992 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_969165 |
|---|
| Protein GI | 120609487 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.541294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCC CTTCCCAACA ACTCCATCCC CACCGCGAGC CCGTCGCCAC GCGCGCGGCC
GCCACCGTGC TGCTGCTGCG CGACGCACCC GGCGGCGGGC TCGAAGTGCT CATGACGCGG
CGCTCGCCGC AGGCCAGCTT CGCGCCGGGG GCCTACGTGT TTCCCGGCGG CGCCATCGAC
GCGCAGGACG CCGGGGCCGC CACGCACGCC CAGGTGGACC ACCGCCCCGC GCAGACGCCG
GACCGCGTCA CCCAGGCCGT CGCCGCCATC CGGGAAAGCT TCGAGGAGCT GGGCGTGCTG
CTCGCGCGGC GCCCGGACGG CAACTTCGCC ACGGCGGAGG ACATCGCCGC GCTCGACCGC
GCCGCGCCCT TCGTGCCGCA GTGCGCCGCG CGCGGCCTGC GCCTGGCGGC CGACGCGGTC
TTCCTGCTCG CGCACTGGAC GGCCGACCGC GACCTGCCCA GGCGCTTCGA CGTGCCCTTC
CTGGTGGCAC GCATGCCGCA GGGGCAGGAG CCGGTGGCCG ACGAGACCGA GCAGTTCGAG
CCCGTCTGGG TGCGCCCGCG CCACGCGCTG GAGCGGCATG CGGCCGGCCA GTTCTTCATG
ATCTTCCCGA CCATCCGCAC GCTGGAGCGG CTGGCGGAAT TCGCCAGCGC CGACGCGGTG
CTCGCCGCCG TGGCCCACGA GCAGCCGCTG TGGACCAGTT GCCCGCGCGC CGGCCTGCTG
GCGGGCCGCG AGGCGCGCTA CATGGAGCAC GAGGCCCCCT ACGGTGAACT GGCCCTGGTC
TGCCCCGACG GGCAGATCGT GCATCCGCTC GACTGGCAGC CCGAGCGGCC CGTGCCGCTG
CTGCGCAACC TGCAGCGGCT GACCGCGGCC AACCCCGGCG CCATGACCGG CCCGGGCACC
AACAGCTACC TGGTGGGCGA CCCGTCCACC GGCTACATCG CCATCGACCC CGGCCCGGCC
GACGAGGTGC ATCTCGAGCG CCTCTGGCAT GCGGCGGGTG GCGATATCCG CGCCATCGTG
TGCACGCACT CCCATGCCGA CCACGCACCG GGCGCCGCCC CGCTGGCAGC ACGCGTGGCC
GCGGCCGGCC GCCCGCGCCC GCCCGTGCTG GGCATGCCTT CCGCCCCCAC GGCGCGCGCG
GCCAGCCGGT TCACGCCCGA CCGTGCATTG GCCGACGGCG AACGGCTCAC CTTGAGCGGC
CGGCAGCTGG AAGGCGACGT CACCCACACC CTCGAAGTGG TCCACACCCC GGGCCATGCC
GCCAACCACC TGTGCCTGCT GCTGCGCGAG GACGGCCTGC TGTTCAGCGG CGACCACATC
CTCAACGGCA GCACCACCGT GATCGATCCG CCGGACGGCA ACATGGACGA CTACCTCGCC
TCGCTCGACC GGCTGGACGC GCTGTGCGAA CGCCACGGCG TGGAGTTCAT CCTGCCGGCC
CACGGCCATG CGATCGCCGG TGCGCGCGGG GCGATCGCGC GGCTGAAGGC GCACCGGCTC
GCGCGCGAGG CCAAAGTGCT CGCGGCCATG CAGGCCCTGC CGGACGGCAG CATGGACGAC
TGGGTGCGCC ACGCCTATGC CGACGTGCCC GAGCGGCTGT GGCCCGTGGC GCAGCGCTCC
CTGCTGGCCC ACGTGGAGCG CCTGCGCGCG CTGGAGGCCG GCCATGCATG A
|
|---|
| Protein sequence | MPRPSQQLHP HREPVATRAA ATVLLLRDAP GGGLEVLMTR RSPQASFAPG AYVFPGGAID
AQDAGAATHA QVDHRPAQTP DRVTQAVAAI RESFEELGVL LARRPDGNFA TAEDIAALDR
AAPFVPQCAA RGLRLAADAV FLLAHWTADR DLPRRFDVPF LVARMPQGQE PVADETEQFE
PVWVRPRHAL ERHAAGQFFM IFPTIRTLER LAEFASADAV LAAVAHEQPL WTSCPRAGLL
AGREARYMEH EAPYGELALV CPDGQIVHPL DWQPERPVPL LRNLQRLTAA NPGAMTGPGT
NSYLVGDPST GYIAIDPGPA DEVHLERLWH AAGGDIRAIV CTHSHADHAP GAAPLAARVA
AAGRPRPPVL GMPSAPTARA ASRFTPDRAL ADGERLTLSG RQLEGDVTHT LEVVHTPGHA
ANHLCLLLRE DGLLFSGDHI LNGSTTVIDP PDGNMDDYLA SLDRLDALCE RHGVEFILPA
HGHAIAGARG AIARLKAHRL AREAKVLAAM QALPDGSMDD WVRHAYADVP ERLWPVAQRS
LLAHVERLRA LEAGHA
|
|---|
| |