Gene Aave_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0762 
Symbol 
ID4669661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp816893 
End bp818575 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content74% 
IMG OID639821961 
Productprotein of unknown function DUF894, DitE 
Protein accessionYP_969134 
Protein GI120609456 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.446257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGATC ACAACAACCA TCCCCCGACC AAGGCACCCG GCAGCTTCGC GCCGCTCGCC 
ATTCCCGTCT TCGCCGTGCT GTGGGCCGCC ACGGTGCTGG GCAACATCGG CAGCTTCATG
CGCGACGTGG CCAGCGCCTG GATGGTGACG GAGCTGTCCT CCAGCCCCGC GGCCGTGGCG
CTGATCCAGA CGGCGGCCAC GCTGCCCGTC TTCCTGCTGG CGATTCCCGC GGGCGTGCTG
TCGGACATCC TGGACCGCCG CCGCTTCCTG ATCGGCGTGC AGGTGCTGCT GGGCGCCGTC
AGCGGCACGC TGCTGGTGCT GGCCCACACG CAGGCGCTGA CGGTGGAGTG GCTGGTGGCG
CTCACCTTCG TGGGCGGCAT CGGCGCCGCG CTGATGGGCC CGACCTGGCA GTCCATCGTG
CCCGAGCTGG TGCCGCGCAG CGAGCTCAAG AGCGCCGTGG CGCTGAATTC GCTGGGCATC
AACATCGCCC GCGCCATCGG GCCGGCCGCC GGCGGCCTGC TGCTGGCGAG CTTCGGCGCC
GCGGCCGCCT ACGGGCTCGA CGTGCTGAGC TATGTGTTCG TGATCGCCGC GCTGCTGTGG
TGGAAGCGCC CGCAGGCCGA GGCCTCGGCG CTGAACGAGC AGTTCTTCGG CGCCTTCCGG
GCCGGCGTGC GCTATGCCCG CGCCAGCCGC GAACTGCACG TGGTGCTGCT GCGCGCGGCG
GTGTTCTTCC TGTTCGCCAG TTCGGTCTGG GCGCTGCTGC CGCTGGTGGC GCGCCGCATG
CTGGGCGGCA CGGCCGGCTT CTACGGCGTG ATGCTGGGCG CCGTGGGCGC GGGCGCCATC
CTGGGCGCGG TGCTGCTGCC GCGGCTGCGC AGGCGCCTGG ACACCGACGG GCTGGTGCTG
CTGGCCTCGG CCGTCACGGC GGTGGTGATG GGCGTGCTGG CCCTGGCGCC ACCGCAGTGG
GCCGCCGTGG CGCTGATGCT GGCGCTGGGC CTGGGCTGGA TCATCGCGCT GACCACGCTC
AACGGCGTGG CCCAGGCGGT GCTGCCCAAC TGGGTGCGCG GCCGCGGGCT GGCCATCTAC
CTGATGGTGT TCAACGGCGC CATGGCGCTG GGCAGCCTGG GCTGGGGCCT GGTGGCCGGC
CAGCTGGGCC TGCCGGCCAC GCTGCTGGCC GGGGCGGGCG GGCTGGTGGC CGTGTCGCTG
GTCTTCCACC GCGTCAAGCT GCCCACGGGC GAAGCCGACC TGCAGCCGTC CAACCACTGG
CCCGAGCCGC TGCTGGCCGA GCCCGTGGCG CACGACCGCG GCCCGGTGAT GGTGCAGGTC
GAGTACCGGG TGCGGCGGCA CGACCTGCCT GCCTTCCTGC AGGCCATGCG GCACGTGGCC
CGCGAGCGCC GCCGCGACGG TGCCTATGCC TGGGGCGTGG CCGAGCACAC GGGGGAGCCG
GGGCGGGTGA TCGAATGGTT CCTGGTCGAG TCCTGGGCGG AGCACCTGCG GCAGCACCGG
CGCGTCTCGC GTGCCGATGC CGACCAGCAG GCCGAGGCAC GGCGCTTCCA CATCGGCCCG
GAGGCCCCGG TGGTGCACCA CTTCCTGGCG CTGGATCCGC GCGATCCCGC AGCCTCCGTG
CCGCGGGACC CGGACCCGGA CGGGCATGGC CACGGCCATG CCGGCAGCGG CGGGGTGGAC
TGA
 
Protein sequence
MADHNNHPPT KAPGSFAPLA IPVFAVLWAA TVLGNIGSFM RDVASAWMVT ELSSSPAAVA 
LIQTAATLPV FLLAIPAGVL SDILDRRRFL IGVQVLLGAV SGTLLVLAHT QALTVEWLVA
LTFVGGIGAA LMGPTWQSIV PELVPRSELK SAVALNSLGI NIARAIGPAA GGLLLASFGA
AAAYGLDVLS YVFVIAALLW WKRPQAEASA LNEQFFGAFR AGVRYARASR ELHVVLLRAA
VFFLFASSVW ALLPLVARRM LGGTAGFYGV MLGAVGAGAI LGAVLLPRLR RRLDTDGLVL
LASAVTAVVM GVLALAPPQW AAVALMLALG LGWIIALTTL NGVAQAVLPN WVRGRGLAIY
LMVFNGAMAL GSLGWGLVAG QLGLPATLLA GAGGLVAVSL VFHRVKLPTG EADLQPSNHW
PEPLLAEPVA HDRGPVMVQV EYRVRRHDLP AFLQAMRHVA RERRRDGAYA WGVAEHTGEP
GRVIEWFLVE SWAEHLRQHR RVSRADADQQ AEARRFHIGP EAPVVHHFLA LDPRDPAASV
PRDPDPDGHG HGHAGSGGVD