| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0726 |
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| Symbol | |
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| ID | 4665322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 780342 |
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| End bp | 781391 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639821927 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_969100 |
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| Protein GI | 120609422 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.687032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG TTCCACAGAT CCCGCCCCAA CCACGCTCAT CCGCTGCGGC GTCCCAGGAT
CGCCGAATCC AGATGCTGCG CACGGCGATG GGCCCGGTGA TCGCTGCTGC GCTGGAAGAC
CCGGACGTGG TGGAAGTGAT GCTCAACCCC GACCGGACAT TGTGGGTGGA TCGGCTGTCC
TCTGGACGTG CACCGCTCGG AGTCGAACTG CCCGAGGCCG ATGGCGAACG CATCATCCGC
CTGGTAGCCG CCCATGTTGG TGCGGAGGTG CATCGCGGCC AACCGCTCTT GACCGCCGAA
CTGCCGGAGA CCGGCGAACG CTTCGAGGGC ATCTTGCCGC CCGCCGCCCC CGGCCCGGCC
TTTGCGCTGC GCAAACGCGC CGTGAGCATC ATCGGTCTGG ATCGCTATGT GGCCGATGGC
ATCCTGACCG CTGGGCAGGC CGAGTTTCTG CGTCATGCAG TGCGCGAGCG GCAGAACATC
CTGATTGCTG GTGGCACCAG TACCGGCAAG ACCACGCTGG CGAACGCGCT GCTGGCCGAG
ATCGCCGCTA CCGGCGACCG CGTGTTGGTG CTCGAAGACA CCATCGAGCT GCAATGCGCG
GCGCGTGACC ACGTGCCGCT GCGCACCCGC GCAGGCGTGG TGTCGATGCA GGAGCTTGTG
CGCGCCACGA TGCGGCTGCG CCCGGATCGC GTGATCGTGG GCGAAGTGCG CGGCGGCGAA
GCGCTGGATC TGGTGAAGGT CTGGGGCACC GGCCACCCCG GTGGCATCGC CACCATCCAT
GCCGGTTCCG CCTTGGGCGC ACTGCTGCGC CTCGAACAGT TGGTTCTCGA AGTAGCGGTG
AATCCGCCGC GTGCGCTGAT CGCCGAGGCG GTCAACGTCG TCATCCACAT CGCAGGCCGT
GGCCGCAAGC GCCACGTCGA AACCATTTCT CGCGTCGTCG GTTTCGACGG CGCGGGCTAC
CGCCTGGCGG ATGCGCTGAA AACGCCATTT CCCGAGCTGC CGCCGGTTCC TTCCCCGTCC
CTCGACCAAT CCTCTGGAGA ACTGCCATGA
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| Protein sequence | MSAVPQIPPQ PRSSAAASQD RRIQMLRTAM GPVIAAALED PDVVEVMLNP DRTLWVDRLS
SGRAPLGVEL PEADGERIIR LVAAHVGAEV HRGQPLLTAE LPETGERFEG ILPPAAPGPA
FALRKRAVSI IGLDRYVADG ILTAGQAEFL RHAVRERQNI LIAGGTSTGK TTLANALLAE
IAATGDRVLV LEDTIELQCA ARDHVPLRTR AGVVSMQELV RATMRLRPDR VIVGEVRGGE
ALDLVKVWGT GHPGGIATIH AGSALGALLR LEQLVLEVAV NPPRALIAEA VNVVIHIAGR
GRKRHVETIS RVVGFDGAGY RLADALKTPF PELPPVPSPS LDQSSGELP
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