Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0724 |
Symbol | |
ID | 4666184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 777866 |
End bp | 779872 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639821925 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_969098 |
Protein GI | 120609420 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGCTC AAGGTGTGTT GTTCGGGCAG ATCGCCGCCG TCTTCGGCAT CGTGATCGCC GGTGTGTGGG GTGCCACGCA ATGGACAGCC GCCGCCTTGG GCTACCAGCT ACGCCTGGGC TCGCCCTGGT TCGACTTGTA CGGCACACCG GTCTATTACC CTTGGAAGCT GTTCGAGTGG TGGTTCTTCT TCGACGCCTA CGCGCCGCAG GTGTTCGACA CCGGCGGCAT GATCGCGGCA AGCAGTGGCC TGTTGGCCGT GGCGGTCGCC ATCGCCATGT CGGTGTGGCG CTCGCGCCAG GCGCGCAAGG TGACGACCTA TGGCTCGGCC CGCTGGGCCG ATGCCGCCGA CATTCGCAAG GCTGGGCTGA CGCAGCCCGC TGGTGTCTTT CTCGGACAGC ATTACGGCCA CTACCTGCGG CACGAAGGGC CGGAACACGT CCTGACCTTT GCGCCGACGC GCTCAGGCAA GGGTGTGGGC CTGGTGGTGC CGACATTGTT GAGTTGGCCC GCGTCCGCCG TCATCCACGA CATCAAAGGC GAGAACTGGC AGATCACAGC CGGCTGGCGC TCGCGCTTCT CGCACTGCCT GCTGTTCAAC CCCACCGATG CCAGTTCGGC GGCCTACAAC CCGCTGCTGG AGGTACGGCG CGGCGCGCAT GAGGTGCGCG ACGTGCAGAA CATCGCCGAC ATCCTGGTCG ATCCAGAAGG CGCGCTGGAG AAGCGCAACC ATTGGGAGAA GACCAGTCAC GCGCTACTGG TCGGCGCGAT CCTGCATGTG CTGTACGCGG GGGAAGACAA GACGCTGCGT GGCGTCGCCA ACTTCCTGTC CGATCCGGCC AGCCCGTTCG AGCTGACCTT GCACCGAATG ATGACGACCA AACACCTGGG CGATGCCCAG CATCCCGTCG TTGCATCCGC TGCCCGCGAA GTGCTCAACA AGTCGGACAA CGAGCGGTCT GGCGTGCTCT CCACCGCCAT GTCGTTCCTC GGTCTGTACC GTGATCCGAC CGTGGCCGAA GTCACTTCGC GCTGCGACTG GCGCATCGCT GACCTGATCG CAGCAGAGCA TCCGGTATCG CTCTATCTGG TGGTGCCGCC TTCCGACATT TCGCGCACCA AGCCGCTGAT CCGGCTGATC CTCAACCAGA TCGGCCGGCG GCTCACCGAA TCGCTCGACG GCTCCGACGG TATCGAGCGC CGGCACAAGC TGCTGCTGAT GCTCGATGAG TTCCCGGCGC TTGGCCGTCT GGACTTCTTC GAGACGGCGC TGGCCTTCAT GGCGGGTTAC GGCATCCGCA GCTTCCTCAT CGCGCAATCG CTCAATCAAA TCGACAAGGC CTACGGCCAG AACCATTCGA TTCTGGACAA CTGCCATGTG CGTGTGACGT TCGCCACCAA CGACGAACGC ACGGCCAAAC GCATTTCAGA AACCCTCGGC ACGGCCACTG AGCTGCGTGC GCAGCGCAAC TACGCGGGCC ACCGGATCGC GCCGTGGCTG GGCCACCTGA TGGTGTCGCG CCAAGAAACC GCACGGCCGC TGCTGACGCC GGGTGAAGTG ATGCAGCTAC CGACCGATGA GGCGGTGGTG ATGGTGTCCA GTGTCGCGCC GATCAAGGCG AAGAAGCTGC GCTACTTCGC CGACGCCAAT TTCAAGCAAC GGGTGATTCC GCCGCCTGCG GTGACGGCAG GCCGCTATGC CGATGTGCCG CCTGCACGAC CTGACGACTG GAGCGGCCTG GCAATACCTG CGGTTCCTGC GGCACCGGCC ACGGCATCCG CCGATGACCT GGAGGCCTTG GGTTCGACCG ACGACGGCGG CCCACGCCGC CAGCCCGAAC TGTCCGAAGC CATCGCCTAT GCCCCAGCGA TGGATGCCCC GGCCAGCGAC CTGTCGCTGC TCGATGACGA CGACATGCCC CCGGTGCTTC CCGGCCAGCT AGACCCCGCC CTGCAACGCA CGTCGCGGCT GGCATCGCTG AACCCCAACG ACGGAATCGA CCTATGA
|
Protein sequence | MQAQGVLFGQ IAAVFGIVIA GVWGATQWTA AALGYQLRLG SPWFDLYGTP VYYPWKLFEW WFFFDAYAPQ VFDTGGMIAA SSGLLAVAVA IAMSVWRSRQ ARKVTTYGSA RWADAADIRK AGLTQPAGVF LGQHYGHYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG ENWQITAGWR SRFSHCLLFN PTDASSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE KRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA SPFELTLHRM MTTKHLGDAQ HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG TATELRAQRN YAGHRIAPWL GHLMVSRQET ARPLLTPGEV MQLPTDEAVV MVSSVAPIKA KKLRYFADAN FKQRVIPPPA VTAGRYADVP PARPDDWSGL AIPAVPAAPA TASADDLEAL GSTDDGGPRR QPELSEAIAY APAMDAPASD LSLLDDDDMP PVLPGQLDPA LQRTSRLASL NPNDGIDL
|
| |