| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0680 |
|---|
| Symbol | |
|---|
| ID | 4666440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 740868 |
|---|
| End bp | 742913 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639821882 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_969055 |
|---|
| Protein GI | 120609377 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TTACCAAAGC CGAAATCCAT GCCATCGAAA CCGCCGCGCC ACTGGAAGTG
GCCGACCCGA CCAAGAACCT GATTCTTGTT CCGCTGTCGC AACTGTTGCC GCGCCGTTCC
AAGCGCAACG TCCGCACGAC CCCGCGCCAG TCCATCCCCG AACTGGCCGC GAGCATCGCC
CGCGTCGGCC TGCTGCAAAA CCTCATCGTC ATCCTGTCCG CCGATGGCGA ACAGTACGAA
GTGGTGGCCG GCGACCGCCG CCTGACCGCG TTGAAGCTGC TGGCGAAGAA GAAGCGCATC
GCCGCCGACT ATGAAGTGCC GTGCCTGCTG GTGGCCGATG CGTCCGCCCG TACCGTGAGC
CTTGCCGAGA ACGTGCAGCG CGAGGCCATG CACCCCGCCG ACCAGTTCGC GGCCTTCGCC
GCGCTGGTCA AGGAAGGCCG TCCCATCGAG GACATTGCCG CCGACTTCGG CGTGTCCCCG
CTGGTGGTGC AGCGCCGCTT GAAGCTGGCG AACGTGTCGC CGCGCCTGAT GACGGATTAC
CGTGCCAGTG GCGTAACGCT GGAACAGTTG ATGGCCTTGA CCATCACCGA CGACCACGCC
GCGCAGGAAG CCGCGTTTTA CGGTGCGCCG GAATGGCAGC GCGGCGCATC CGCGCTGCGC
GACCGCCTGA CCGAGCGTGA AATCACCGCC ACGCATCCGC TGGTGCGCTT CGTCGGGCTC
GACGCCTACA CGGCAGCAGG CGGCGGCATC CGCCGCGACC TGTTCGCCGA AGGCGAAGCC
GGAACCTATC TGACCGATGC GGCGCTGCTG GAAACGCTGG TGCGCGGCAA GCTGGACGCG
CGGGCCGAGG ACGTGCGCGC CGAGGGTTGG GCATGGGTGG AAGCCGTGCC GCACATGAGC
CACGCCGACC GGCAGGCGTT CCAGAACGCC CCGCGTCAGC GCCGCGAACC GACCGCCCGC
GAAGCCCGCC GCATCGCTTC GCTGCAAACC CGTCTCGACA AGATCGACGC CGAACTGGAA
GACGCCTACG ACGCCGAGGA CGAGGACAAG ACCGAGGCGC TGGAACCGCG CCGCGAACAG
GTGGCCGGGG AACTGAAAGC CGTGGAGGAT GCCTTGCAGG GCTACGCCCC GGACGTGCGC
GCCGTGGCCG GTGCCATCGT CACGCTCGAC ACCAGCGGCG AGGCCGTGAT TCATCGCGGC
CTGCTGCGTG AAGCCGAGGC GAAGGCACTG CGCACGCTGG AAAAGCTGCG GCAGGGTTTC
GGCGCAGGCG ACGGCGCGAG CGACGAGGAA GGCGACGACG CCGACGAAGC GCCCAAGACC
GCGAGCCTGT CCGACCGGCT GACGCAACGG TTGAGCGCCC ATCGCACGGC GGCGCTGCAA
ATCGAAGTCG CACGGCATCC GCATATCGCC TTGGCCGCGC TGGTGCATGG CATGGTGCGG
GTCGTCCTGC AGGACGGCTA CCGCCGCGAT GGTTTGCCGC TCGGCGTGCG TCTGGACGTG
CAAGACCGGC TGGAAGGCAT GGCCCCGGAC ATGCCGGAAT CGCCCGCCGC CGTGGCGCTG
CGCACGTTGC AGGAAGTCGC AGGCGAAGGG TTGCCCGAGG ATAGCGCCGA ACTGTTTGCC
GCGTTGCAAG CGAAGTCGCA AGACGAACTG GTGCACCTGC TGGCCGTGTG CGTGGCGTCC
ACGGTGGACG TTGTGACGCC TCGCGCTTCA CAGCCCCAGC CCGGCACGGA ATTGGCGCAA
GCCGTGGGGT TGAACATGGC CGCGTGGTGG AAGCCGACCG CCGAAGGTTA TTTCCGCCAC
ATCGCCAAGC CCGTGATTCT GCAAGCCGTC AGCCAGTACG CCCCGGCGCA CGTCACCCGG
CTGGCGAAGT TGAAGAAAGG CGACATTGCC AGCGAAGCGG AACGGCTGGC GGATGGCACA
GGCTGGATGC CTGCCGTGTT CCACATCGAC CACAACACCG AGCCGGAAGG CGCACTTGCT
GCGGACGAAG CGGATACGCC GGAAGATGCC GCCGACGAAG TGGAAGCGCA CGCGCTGGCC
GCGTGA
|
|---|
| Protein sequence | MNAVTKAEIH AIETAAPLEV ADPTKNLILV PLSQLLPRRS KRNVRTTPRQ SIPELAASIA
RVGLLQNLIV ILSADGEQYE VVAGDRRLTA LKLLAKKKRI AADYEVPCLL VADASARTVS
LAENVQREAM HPADQFAAFA ALVKEGRPIE DIAADFGVSP LVVQRRLKLA NVSPRLMTDY
RASGVTLEQL MALTITDDHA AQEAAFYGAP EWQRGASALR DRLTEREITA THPLVRFVGL
DAYTAAGGGI RRDLFAEGEA GTYLTDAALL ETLVRGKLDA RAEDVRAEGW AWVEAVPHMS
HADRQAFQNA PRQRREPTAR EARRIASLQT RLDKIDAELE DAYDAEDEDK TEALEPRREQ
VAGELKAVED ALQGYAPDVR AVAGAIVTLD TSGEAVIHRG LLREAEAKAL RTLEKLRQGF
GAGDGASDEE GDDADEAPKT ASLSDRLTQR LSAHRTAALQ IEVARHPHIA LAALVHGMVR
VVLQDGYRRD GLPLGVRLDV QDRLEGMAPD MPESPAAVAL RTLQEVAGEG LPEDSAELFA
ALQAKSQDEL VHLLAVCVAS TVDVVTPRAS QPQPGTELAQ AVGLNMAAWW KPTAEGYFRH
IAKPVILQAV SQYAPAHVTR LAKLKKGDIA SEAERLADGT GWMPAVFHID HNTEPEGALA
ADEADTPEDA ADEVEAHALA A
|
|---|
| |