Gene Aave_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0637 
Symbol 
ID4667669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp686971 
End bp688014 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content65% 
IMG OID639821842 
Producttwitching motility protein 
Protein accessionYP_969015 
Protein GI120609337 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT 
TIGRFAM ID[TIGR01420] pilus retraction protein PilT 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCA CCCAACTGCT CGCCTTCAGC GTGAAGAACA AGGCCTCCGA CCTGCACCTG 
TCCGCGGGCC TGCCTCCGAT GATCCGCGTG CATGGCGACG TGCGCCGCAT CAACGTCGAT
GCCCTCGACC ACAAGACCGT GCACGCCATG GTGTACGACA TCATGAGCGA CGCCCAGCGC
AAGGTGTACG AGGAGTTCCT GGAAGTGGAC TTCTCCTTCG AGATCGAGGG CCTGGCGCGC
TTCCGGGTCA ACGCCTTCAA CCAGAACCGC GGCGCGGCCG CCGTGTTCCG GACCATCCCG
AGCAAGATCC TCACGCTCGA GCAGCTCAAC GCCCCGCGCA TCTTCGCCGA CCTTGCCCTC
AAGCCGCGCG GCCTCGTGCT CGTCACCGGC CCCACCGGCT CGGGCAAGTC CACCACGCTC
GCGGCCATGG TGAACCACCT CAACGAGACC GAATACGGGC ACATCCTGAC GGTGGAAGAC
CCGATCGAAT TCGTGCACGA CTCCAAGAAG TGCCTGATCA ACCAGCGCGA GGTCGGGCCG
ATGACGCTGT CCTTCGCCGC CGCGCTGAAA TCCGCGCTGC GCGAAGATCC GGACGCCATC
CTCGTGGGCG AAATGCGCGA CCTCGAAACC ATCCGCCTGG CCATGACCGC CGCCGAGACG
GGCCACCTCG TGTTCGGCAC CCTGCACACT TCCAGCGCGG CCAAGACCAT CGACCGGATC
ATCGACGTGT TCCCCGCCGA GGAAAAGGAA ATGGTGCGCG CCATGCTGTC CGAATCGCTG
CAGGCCGTGA TCTCCCAGAC GCTGTGCAAG ACCAAGGACG GCCAGGGCCG GGTGGCGGCG
CACGAGATCA TGCTGGGCAC GAGCGCCATC CGCAACCTGA TCCGCGAGGC CAAGGTGGCG
CAGATGTACT CCACCATCCA GACCAGCAGC AGCGTCGGCA TGCAGACGCT GGACCAGAAC
CTCACCGACC TCGTGCGGCG CAACATCATC AGCCCCGCGG AAGCCCGCGG CAAGGCCAAG
ATTCCCGAGA ACTTCCCGGG CTGA
 
Protein sequence
MDITQLLAFS VKNKASDLHL SAGLPPMIRV HGDVRRINVD ALDHKTVHAM VYDIMSDAQR 
KVYEEFLEVD FSFEIEGLAR FRVNAFNQNR GAAAVFRTIP SKILTLEQLN APRIFADLAL
KPRGLVLVTG PTGSGKSTTL AAMVNHLNET EYGHILTVED PIEFVHDSKK CLINQREVGP
MTLSFAAALK SALREDPDAI LVGEMRDLET IRLAMTAAET GHLVFGTLHT SSAAKTIDRI
IDVFPAEEKE MVRAMLSESL QAVISQTLCK TKDGQGRVAA HEIMLGTSAI RNLIREAKVA
QMYSTIQTSS SVGMQTLDQN LTDLVRRNII SPAEARGKAK IPENFPG