Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0619 |
Symbol | rpmD |
ID | 4667751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 673092 |
End bp | 673274 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639821823 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_968997 |
Protein GI | 120609319 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.268532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGC AACAAACCGT CAAGATTCAA CTGGTGCGCA GCCCCATCGG CACCAAGGAA TCGCACCGCG CCACCGTTCG CGGCCTGGGC CTGCGCAAGC TGAACAGCGT CAGCGAGCTC AAGGACAGCC CCGAAGTGCG CGGCATGATC AACAAGATCA GCTATCTGGT CAAGGTCCTC TGA
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Protein sequence | MTTQQTVKIQ LVRSPIGTKE SHRATVRGLG LRKLNSVSEL KDSPEVRGMI NKISYLVKVL
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