Gene Aave_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0601 
Symbol 
ID4668652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp657919 
End bp658761 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content73% 
IMG OID639821805 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_968979 
Protein GI120609301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG ATACCCCCTC CCCCGCATCC GAGCAACCCG CGATCGCCTT CATCGGCGGC 
GGCAACATGG CCAGCGCCAT CATCGGAGGG CTGATCCGGC AGGGCATGCC GGCCTCCGGC
ATCGAGGTGG TCGAGCCCTG GGAGGAAGCG CGGGCCGCCC TGCGCGCGCA CCACGGAATC
GAGGCCCTGC CGGAGGCCGG GACGGCACTG GAGCGCGCCG GCGTGGTGGT GTGGGCGGTC
AAGCCCCAGA CGTTCAAGGA GGCGGCGCAG CAGGCACGCG CCCATACGGC GAATGCGGTG
CACCTCAGCG TGGCCGCCGG CATCCGGTCG GACAGTATCG CCGCCTGGCT GGGCTCGGAT
TGCGTGGTGC GCGCCATGCC GAACACGCCC GCGCTGATCG GGCGCGGCAT GACGGCGCTC
TATGCCCGCC CGCAGGTCAG CCCCGCGCAG CGCGCGGCCG TGCAGCAGGT GCTGTCGTCC
ACGGGCGAAC TGCTCTGGGT GGACGAGGAG CCACAGCTCG ACGCCGTGAC CGCGCTGTCG
GGATCCGGCC CGGCCTATGT CTTCCTGTTC CTGGAGGCGA TGGCGCGCGC GGGGGTGGAA
ATGGGCCTGG CGCCCGAGCA GGCGCACCAG CTGGCGGTGG GTACGTTCAC GGGGGCGTCG
GAACTGGCGC GCCGCTCGGA CGAGTCGCCC GCGGTGCTGC GCCAGCGTGT GACCTCCAAG
GGCGGCACGA CCTTCGCGGC GGTGCAGGCG ATGGAACAGG CGGGCGTGCC GGAGCATTTC
ATCCGGGCGA TGAAGGCCGC GCAGGCGCGG GCCCGGGAAC TGGGGGACGA GTTCGGAAGG
TGA
 
Protein sequence
MTPDTPSPAS EQPAIAFIGG GNMASAIIGG LIRQGMPASG IEVVEPWEEA RAALRAHHGI 
EALPEAGTAL ERAGVVVWAV KPQTFKEAAQ QARAHTANAV HLSVAAGIRS DSIAAWLGSD
CVVRAMPNTP ALIGRGMTAL YARPQVSPAQ RAAVQQVLSS TGELLWVDEE PQLDAVTALS
GSGPAYVFLF LEAMARAGVE MGLAPEQAHQ LAVGTFTGAS ELARRSDESP AVLRQRVTSK
GGTTFAAVQA MEQAGVPEHF IRAMKAAQAR ARELGDEFGR