Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0497 |
Symbol | |
ID | 4666782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 535815 |
End bp | 538340 |
Gene Length | 2526 bp |
Protein Length | 841 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821703 |
Product | Rhs element Vgr protein |
Protein accession | YP_968877 |
Protein GI | 120609199 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCC GCGTCACCAT ACAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG CAGGGGCGAG AAGAACTGAG CCAGGTTTTC AGCCTGGACA TCGACCTGCT GAGCGAGGAC AAAAGCATTG ACCCGAAGGC GCTGCTGGGC AAGAGCGCCA CGGTGGTGGT GGAAACCGAA GGCGGCGGCC GGCGCTACCT CGACGGGATC GTGACGCGCT TCGGCACGCA GGGGCAGGAC CACCGCTTCT ATGCCTACCG CCTGCGGCTG CAGCCCTGGA TCTGGCTGGC CTCGCGCAAG AGCGATTTCC GGATATTCCA GAACAAGAGC GTGCCCGACA TCATCGAAGA GGTGCTGGGC GTCTATGGAT ACCCGCTGGA GAAGAAGCTC ACCCGCAGCT ACCGCACCTG GGAATACTGC GTGCAATATG ACGAGAGCGA CCTGCAGTTC GTCTCGCGGC TGATGGAGCA CGAGGGCATC TATTACTACC ATCAGCATGC GCAGGGCCAG CACACGCTCA CGCTGGCCGA TGACATCGTG GCCTCGCACC AGCCGCTGCC CGGGGCGTCC ACGATTCCCT TCTATCCGCC GGAGAAGTCG GCCACGGCGG ACCGCGAGAA CATCCACGCG TGGGAGCTGC ACGAGGAGAT CCACTCGGGC CGCTTCTACA ACGACGACTA CGACTTCAAG AAGCCGAAGG CGGACCTGGC GAACATGCGG CAGATGCCGC CGGGCCACAG CCACGACGCC TACGAGACCT ACGAGTGGCC CGGGGGCTAC ACGGAGTTCG GCGACGGCGA GGCGTATGCA CGGGTGCGGC TGCAGGAGAA CCTGAGCGGG CGCAGCACGG TGCGCGGCGA ATCGCGCCAC CGGTCCCTGG CCATGGGCTA CCTCTTCACG CTGGAGAACT ACCCGCGCGG GGACCAGAAC CAGCAGTACC TCATCACCGG CCTGCAATAC CACTTCAAGG AGAACCCGCG GGTGAGCGCG GCGAACCCCG GGCAAAAAGG CACGGTGCAG GAAGAGGGCT CGTTCCAGCG GTTCACGCTG CAGGCGCAGC CCACGAGCCT GCCCTACACC CCCGCACGGG TGACGCCCAA GCCCAGGACG ACGGGACCGC AGACGGCGGT GGTGGTGGGC CCGCCGGGCG AGGAGATCTG GCCGGACCAG TACGGGCGGG TGAAGGTACA GTTCCACTGG GACCGGCAGG GCAAGTTCGA CGAGCAGTCC AGCTGCTGGA TCCGGGTGTC GCACGGCTGG GCGGGGCAGA ACTACGGGAG CATCTACCTG CCGCGCATAG GCCAAGAGGT CATCATCGAT TTCCTGTCCG GAGATCCGGA CCAGCCGATC ATCACGGGGC GGGTGTACAA CGCGGACCAG ATGCCGCCGT GGAAGCTGCC GGAGCACAAG ACGCAGTCGG GCACGCTCAC GCGCTGGAGC AAGGGAGGTG GCGGGGCGAG CATGCTGCGC TTCGAGGACC AGAAGGGGAT AGAGCACCTG GAGCTGTCGA ACACGTACGG CAACACGTAC CTGAACATGG GGTACCTGAT GCACCAGGGC ACGGGGTCGC AGCGGGGGTA CGGCTTCGAG CTGCGCACGG ACCTGTGGGG CTCGATCCGG GCGGACAAGG GCCTGCTCAT CACCACCTAT CCGCAGGACT TTACCTCTCG CGTATCGGTG AATAACCCCG ACGGCTTCGA CCAGTTGGGC GCGGGCCTGG CCGGCACGGC TTCGCTCATG CAGCAGGCCA GCCAGGCGGC GCAGACGCTG GACGCGAACC TCGGTGCGCT CAACTCGCTC AAGACCTCGC ACATGATGGA ACTGGGCGCG GGCATCGCGG CCATGACCGG CGCGCAGGCG GCATCGGCGT CGATCTCCAA GGCCGCGGCG GCGCTCTCGG CCTTCCAGGG GGGTGGCGGC GGTGCACCGG AAGCGGCCCT GCCATCCGAC ACCGATCCGG CCATGCCGCA GTCGCAGGCG CTGCGCGAAC TCTCGCGCGA CATCACGCAG CCCATCGTCT CCATCGTCAG CCCGCAGGGC CACACGATGG TCAGCCCCAA GCCGATCGTC ATCAGCTCGG GCCAGAGCGC GTCGATGCAC GCCACGCAGC ACATCACCGT CTCCAGCGGC GCGCAGCTCA CGCAGCTCGC CAAGGCCGGC ATGCTGACGC ACGTCTCCGA AGGCGGGCAG CGCACCACGG TGGGCGCGGG CGACATCGCC ACCGACGCGC AGACGGGCAA CCTCAACCTC ACCGCCCAGC AGAACGCGAC CCTGGCCTCG CGCACCGACA CCGCCACCGT CGTGGGCCAG CAGAACGTCA ACCTGCAGGC CACCGAGGAC TCGGTGCTCG TCAAGGCCGG CCAGCACATC CGCCTGCAGG CGGGCGCGAC GATCACGCTC ACCGCGGGCG AAGGTGCTTC CATCACCCTC ACGAGCGACG GCAAGGTGGA GATCCGCGGC AAGAACGGGC TCATCGAGCT CAAGGACGTG CTCACCGTGC TCGGCAAGCC CGTCAACATC AACTGA
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Protein sequence | MTRRVTIQTP LGEQLQFRQL QGREELSQVF SLDIDLLSED KSIDPKALLG KSATVVVETE GGGRRYLDGI VTRFGTQGQD HRFYAYRLRL QPWIWLASRK SDFRIFQNKS VPDIIEEVLG VYGYPLEKKL TRSYRTWEYC VQYDESDLQF VSRLMEHEGI YYYHQHAQGQ HTLTLADDIV ASHQPLPGAS TIPFYPPEKS ATADRENIHA WELHEEIHSG RFYNDDYDFK KPKADLANMR QMPPGHSHDA YETYEWPGGY TEFGDGEAYA RVRLQENLSG RSTVRGESRH RSLAMGYLFT LENYPRGDQN QQYLITGLQY HFKENPRVSA ANPGQKGTVQ EEGSFQRFTL QAQPTSLPYT PARVTPKPRT TGPQTAVVVG PPGEEIWPDQ YGRVKVQFHW DRQGKFDEQS SCWIRVSHGW AGQNYGSIYL PRIGQEVIID FLSGDPDQPI ITGRVYNADQ MPPWKLPEHK TQSGTLTRWS KGGGGASMLR FEDQKGIEHL ELSNTYGNTY LNMGYLMHQG TGSQRGYGFE LRTDLWGSIR ADKGLLITTY PQDFTSRVSV NNPDGFDQLG AGLAGTASLM QQASQAAQTL DANLGALNSL KTSHMMELGA GIAAMTGAQA ASASISKAAA ALSAFQGGGG GAPEAALPSD TDPAMPQSQA LRELSRDITQ PIVSIVSPQG HTMVSPKPIV ISSGQSASMH ATQHITVSSG AQLTQLAKAG MLTHVSEGGQ RTTVGAGDIA TDAQTGNLNL TAQQNATLAS RTDTATVVGQ QNVNLQATED SVLVKAGQHI RLQAGATITL TAGEGASITL TSDGKVEIRG KNGLIELKDV LTVLGKPVNI N
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