Gene Aave_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0497 
Symbol 
ID4666782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp535815 
End bp538340 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content67% 
IMG OID639821703 
ProductRhs element Vgr protein 
Protein accessionYP_968877 
Protein GI120609199 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC GCGTCACCAT ACAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG 
CAGGGGCGAG AAGAACTGAG CCAGGTTTTC AGCCTGGACA TCGACCTGCT GAGCGAGGAC
AAAAGCATTG ACCCGAAGGC GCTGCTGGGC AAGAGCGCCA CGGTGGTGGT GGAAACCGAA
GGCGGCGGCC GGCGCTACCT CGACGGGATC GTGACGCGCT TCGGCACGCA GGGGCAGGAC
CACCGCTTCT ATGCCTACCG CCTGCGGCTG CAGCCCTGGA TCTGGCTGGC CTCGCGCAAG
AGCGATTTCC GGATATTCCA GAACAAGAGC GTGCCCGACA TCATCGAAGA GGTGCTGGGC
GTCTATGGAT ACCCGCTGGA GAAGAAGCTC ACCCGCAGCT ACCGCACCTG GGAATACTGC
GTGCAATATG ACGAGAGCGA CCTGCAGTTC GTCTCGCGGC TGATGGAGCA CGAGGGCATC
TATTACTACC ATCAGCATGC GCAGGGCCAG CACACGCTCA CGCTGGCCGA TGACATCGTG
GCCTCGCACC AGCCGCTGCC CGGGGCGTCC ACGATTCCCT TCTATCCGCC GGAGAAGTCG
GCCACGGCGG ACCGCGAGAA CATCCACGCG TGGGAGCTGC ACGAGGAGAT CCACTCGGGC
CGCTTCTACA ACGACGACTA CGACTTCAAG AAGCCGAAGG CGGACCTGGC GAACATGCGG
CAGATGCCGC CGGGCCACAG CCACGACGCC TACGAGACCT ACGAGTGGCC CGGGGGCTAC
ACGGAGTTCG GCGACGGCGA GGCGTATGCA CGGGTGCGGC TGCAGGAGAA CCTGAGCGGG
CGCAGCACGG TGCGCGGCGA ATCGCGCCAC CGGTCCCTGG CCATGGGCTA CCTCTTCACG
CTGGAGAACT ACCCGCGCGG GGACCAGAAC CAGCAGTACC TCATCACCGG CCTGCAATAC
CACTTCAAGG AGAACCCGCG GGTGAGCGCG GCGAACCCCG GGCAAAAAGG CACGGTGCAG
GAAGAGGGCT CGTTCCAGCG GTTCACGCTG CAGGCGCAGC CCACGAGCCT GCCCTACACC
CCCGCACGGG TGACGCCCAA GCCCAGGACG ACGGGACCGC AGACGGCGGT GGTGGTGGGC
CCGCCGGGCG AGGAGATCTG GCCGGACCAG TACGGGCGGG TGAAGGTACA GTTCCACTGG
GACCGGCAGG GCAAGTTCGA CGAGCAGTCC AGCTGCTGGA TCCGGGTGTC GCACGGCTGG
GCGGGGCAGA ACTACGGGAG CATCTACCTG CCGCGCATAG GCCAAGAGGT CATCATCGAT
TTCCTGTCCG GAGATCCGGA CCAGCCGATC ATCACGGGGC GGGTGTACAA CGCGGACCAG
ATGCCGCCGT GGAAGCTGCC GGAGCACAAG ACGCAGTCGG GCACGCTCAC GCGCTGGAGC
AAGGGAGGTG GCGGGGCGAG CATGCTGCGC TTCGAGGACC AGAAGGGGAT AGAGCACCTG
GAGCTGTCGA ACACGTACGG CAACACGTAC CTGAACATGG GGTACCTGAT GCACCAGGGC
ACGGGGTCGC AGCGGGGGTA CGGCTTCGAG CTGCGCACGG ACCTGTGGGG CTCGATCCGG
GCGGACAAGG GCCTGCTCAT CACCACCTAT CCGCAGGACT TTACCTCTCG CGTATCGGTG
AATAACCCCG ACGGCTTCGA CCAGTTGGGC GCGGGCCTGG CCGGCACGGC TTCGCTCATG
CAGCAGGCCA GCCAGGCGGC GCAGACGCTG GACGCGAACC TCGGTGCGCT CAACTCGCTC
AAGACCTCGC ACATGATGGA ACTGGGCGCG GGCATCGCGG CCATGACCGG CGCGCAGGCG
GCATCGGCGT CGATCTCCAA GGCCGCGGCG GCGCTCTCGG CCTTCCAGGG GGGTGGCGGC
GGTGCACCGG AAGCGGCCCT GCCATCCGAC ACCGATCCGG CCATGCCGCA GTCGCAGGCG
CTGCGCGAAC TCTCGCGCGA CATCACGCAG CCCATCGTCT CCATCGTCAG CCCGCAGGGC
CACACGATGG TCAGCCCCAA GCCGATCGTC ATCAGCTCGG GCCAGAGCGC GTCGATGCAC
GCCACGCAGC ACATCACCGT CTCCAGCGGC GCGCAGCTCA CGCAGCTCGC CAAGGCCGGC
ATGCTGACGC ACGTCTCCGA AGGCGGGCAG CGCACCACGG TGGGCGCGGG CGACATCGCC
ACCGACGCGC AGACGGGCAA CCTCAACCTC ACCGCCCAGC AGAACGCGAC CCTGGCCTCG
CGCACCGACA CCGCCACCGT CGTGGGCCAG CAGAACGTCA ACCTGCAGGC CACCGAGGAC
TCGGTGCTCG TCAAGGCCGG CCAGCACATC CGCCTGCAGG CGGGCGCGAC GATCACGCTC
ACCGCGGGCG AAGGTGCTTC CATCACCCTC ACGAGCGACG GCAAGGTGGA GATCCGCGGC
AAGAACGGGC TCATCGAGCT CAAGGACGTG CTCACCGTGC TCGGCAAGCC CGTCAACATC
AACTGA
 
Protein sequence
MTRRVTIQTP LGEQLQFRQL QGREELSQVF SLDIDLLSED KSIDPKALLG KSATVVVETE 
GGGRRYLDGI VTRFGTQGQD HRFYAYRLRL QPWIWLASRK SDFRIFQNKS VPDIIEEVLG
VYGYPLEKKL TRSYRTWEYC VQYDESDLQF VSRLMEHEGI YYYHQHAQGQ HTLTLADDIV
ASHQPLPGAS TIPFYPPEKS ATADRENIHA WELHEEIHSG RFYNDDYDFK KPKADLANMR
QMPPGHSHDA YETYEWPGGY TEFGDGEAYA RVRLQENLSG RSTVRGESRH RSLAMGYLFT
LENYPRGDQN QQYLITGLQY HFKENPRVSA ANPGQKGTVQ EEGSFQRFTL QAQPTSLPYT
PARVTPKPRT TGPQTAVVVG PPGEEIWPDQ YGRVKVQFHW DRQGKFDEQS SCWIRVSHGW
AGQNYGSIYL PRIGQEVIID FLSGDPDQPI ITGRVYNADQ MPPWKLPEHK TQSGTLTRWS
KGGGGASMLR FEDQKGIEHL ELSNTYGNTY LNMGYLMHQG TGSQRGYGFE LRTDLWGSIR
ADKGLLITTY PQDFTSRVSV NNPDGFDQLG AGLAGTASLM QQASQAAQTL DANLGALNSL
KTSHMMELGA GIAAMTGAQA ASASISKAAA ALSAFQGGGG GAPEAALPSD TDPAMPQSQA
LRELSRDITQ PIVSIVSPQG HTMVSPKPIV ISSGQSASMH ATQHITVSSG AQLTQLAKAG
MLTHVSEGGQ RTTVGAGDIA TDAQTGNLNL TAQQNATLAS RTDTATVVGQ QNVNLQATED
SVLVKAGQHI RLQAGATITL TAGEGASITL TSDGKVEIRG KNGLIELKDV LTVLGKPVNI
N