| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0419 |
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| Symbol | |
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| ID | 4667227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 450819 |
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| End bp | 452408 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639821626 |
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| Product | RNA polymerase, sigma 54 subunit, RpoN |
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| Protein accession | YP_968800 |
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| Protein GI | 120609122 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.361593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCGG GACTGTCGCT GCGCATCTCG CAGCATCTGG CGCTGACGCC GCAACTGCAG
CAATCGATCC GGCTGCTGCA GCTGTCCACG CTGGAGCTGT CGCAGGAAGT CGAGCAGATG
CTCGACGAGA ACCCCTTCCT GGAGCGCAAC CCGGACGAGG CACCGCGCGA GGAGTTCGGG
CTGCTGCAGG CGGATGCGCC GGTGAGCGAC GCCGACCGCG GGGCGGAGGA GTCCCTCTAT
TCGCCGGCCA GCGGGGCGGT GGAGACGGCG GCCTCGGCGC CGGGCGAGGG CGCATCCGAA
GGATCGGAGG CGCCGGAAGC TCCCGATGCG CCGGACTGGG AGGGCGACGG CACCGTCGAG
ATGGCGCCCG ACGACGGCGA GTGGGGCGGC GAGGCGCCCG CGCGCACGCG CAACCAGCTG
GGGGACGAAG ACGACACGGA CGCGACCGAA CTCGCGCGCG AGCACGAGTC GCTCACCGAT
TACCTGCACC GGCAGGCGCT GTCGCTGCGC CTGTCGGAGG TGGACCGCGC GGCGCTGCGC
TTCCTGATCG AATCGCTGAA CGACGACGGC TACCTCGACG AATCGCTGGA GGCACTGGCC
GTGGCCCTCG CGGGCGAGGA AGACCCCGAG CAGGTGGAGG AACTGGTGCA TCGCTTCACG
GTGGCGCTGC GGCTGCTGCA GAGCCTGGAG CCCGTGGGCG TGGGCGCGCG CGGCCTGAGC
GAATGCCTGG CGCTGCAGCT GCGGGCCCTG CAGGAAGATG GCGACGCGGA GCCCGAAGTG
CTGCAGGCGG CGCTGCGCAT CTGCAATCAG CCGCTGGAGA TGCTGGCGCG GCGCGACGTG
CGCCGGCTCG CGCAGGGTTG CGGTGCCGGC GAGGAGTGCA CGCGCGCGGC GATGGCGCTC
ATCGCGCGGC TGGAGCCCCG GCCGGGCCGG GCTTTCGCGC AGGTCGAGCG CAACATCATC
GTGCCCGACG TGATCGTGAA GAAGAGCAGT GGCCGCGGGG CCGCGCATGC GTTCACCGTG
CAGCTCAACC CGGATGTCAT GCCGCGGCTG CGCGTGCACG ACATCTATGC CGGGGCGCTG
CGCGGCAACC GCGGCGGCGA GGGGCACCAG GCGCTGCAGC AGCGGCTGCA GGAAGCGCGT
TGGTTCATCA AGAACATCCA GCAGCGGTTC GACACCATCC TGCGCGTCTC GCGCGCCATC
GTGGACCGGC AGAAGAACTT CTTCGTGCAT GGCGAGCTGG CCATGCGGCC GCTCGTGCTG
CGCGACATCG CCGACGAACT GGGGCTGCAC GAATCGACGA TCAGCCGGGT GACCACGGCC
AAGTACATGG CCACGCCCCA GGGTACCTAC GAGCTGAAGT ATTTCTTCGG CTCGGGCCTG
GGCACGGAAA CGGGCGGCAA TGCGTCGAGC ACGGCCGTGC GTGCGCTGAT CAAGCAGTTC
GTCGCGTCGG AGAGCCCGGC CAAGCCGCTG TCGGACAGCC AGATCGCGGA GATGCTCAAG
GAGCAGGGCA TCGAATGCGC GCGCCGCACG GTGGCGAAAT ACCGCGAGGC GCTGAAGATC
GCACCGGCCA ACCTGCGCAA GGCGCTGTAA
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| Protein sequence | MKPGLSLRIS QHLALTPQLQ QSIRLLQLST LELSQEVEQM LDENPFLERN PDEAPREEFG
LLQADAPVSD ADRGAEESLY SPASGAVETA ASAPGEGASE GSEAPEAPDA PDWEGDGTVE
MAPDDGEWGG EAPARTRNQL GDEDDTDATE LAREHESLTD YLHRQALSLR LSEVDRAALR
FLIESLNDDG YLDESLEALA VALAGEEDPE QVEELVHRFT VALRLLQSLE PVGVGARGLS
ECLALQLRAL QEDGDAEPEV LQAALRICNQ PLEMLARRDV RRLAQGCGAG EECTRAAMAL
IARLEPRPGR AFAQVERNII VPDVIVKKSS GRGAAHAFTV QLNPDVMPRL RVHDIYAGAL
RGNRGGEGHQ ALQQRLQEAR WFIKNIQQRF DTILRVSRAI VDRQKNFFVH GELAMRPLVL
RDIADELGLH ESTISRVTTA KYMATPQGTY ELKYFFGSGL GTETGGNASS TAVRALIKQF
VASESPAKPL SDSQIAEMLK EQGIECARRT VAKYREALKI APANLRKAL
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