| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0347 |
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| Symbol | rpsQ |
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| ID | 4666466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 375081 |
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| End bp | 375350 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639821553 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_968728 |
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| Protein GI | 120609050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.451528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000267992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACGGAAG CTAAAAAATC CCTCAAGCGC ACCTTGGTTG GCAAGGTGGT CAGCGACAAG
CGCGAAAAGA CCGTGACGGT GCTCGTCGAG CGCCGCGTGA AGCACCCGAT CTACGACAAG
ATCGTGATCA AGTCGAGCAA GTACCACGCG CACGACGAGA ACAGCGAGTA CAAGCTGGGC
GACACGATCG AGATCACGGA AAGCCGCCCG CTCTCCAAGA CCAAGAACTG GGTTGCGACC
CGCCTGGTCC AGAAGGCTGC CCTGGTCTGA
|
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| Protein sequence | MTEAKKSLKR TLVGKVVSDK REKTVTVLVE RRVKHPIYDK IVIKSSKYHA HDENSEYKLG
DTIEITESRP LSKTKNWVAT RLVQKAALV
|
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