| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0344 |
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| Symbol | rpsC |
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| ID | 4667412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 373557 |
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| End bp | 374438 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639821550 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_968725 |
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| Protein GI | 120609047 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.212701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000331478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGACAGA AAATCCATCC TACCGGCTTC CGCCTGGCCG TGAGCCGCAA CTGGGCCAGC
CGCTGGTACG CGAACAACCG TGACTTCGCC GGCATGCTGG CCGAAGACAT CAAGGTGCGC
GAGTACCTGA AGGCCAAGCT CAAGAACGCC GCCGTGTCGC GCATCCTGAT CGAGCGTCCT
GCCAAGAACG CCCGCATCAC GATCTATTCG GCACGCCCCG GCGTAGTGAT CGGCAAGAAG
GGCGAGGACA TCGAGAACCT GAAGAAGGAA CTCGCCTCCC GCCTGGGCGT GCCGGTCGCA
GTGAACATCG AGGAAGTGCG CAAGCCCGAA ATCGATGCCA AGCTGATCGC CGACTCGATC
ACCCAGCAGC TCGAAAAGCG CATCATGTTC CGCCGCGCCA TGAAGCGTGC GATGCAGAAC
GCGATGCGCC TGGGCGCCCA GGGCATCAAG ATCATGTCGT CTGGTCGCCT GAACGGCATC
GAAATCGCCC GTACCGAGTG GTACCGCGAA GGCCGTGTGC CGCTGCACAC CCTGCGCGCC
GACATCGACT ACGGCACTTC CGAAGCGTTC ACCACCTATG GGGTGATCGG TCTGAAGGTG
TGGGTCTACA AGGGCGATAC GCTGGGCCGC AACGACCTGC CGGCGGTCGA GACGCCCCGT
CCGGAAGAAG AGCGCCGCCC CCGCGGTCCC CGCCGTGACG GCCGCCCTGG TGGCGACCGT
GCCGGTGCAG GCCGTGGTCC CCGTCGTCCC ATGGGTGGCA ATGCCGCTCC GGCCGATGGC
AGCGACAAGC CCGCTGGTGC CGGTGGCACC GACGCAACCG CCGTTAAGCG CGTTCGCAAG
GTTGACGCGC CCGCTACAGC AGCGGACGGC AAAGGAGAAT AA
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| Protein sequence | MGQKIHPTGF RLAVSRNWAS RWYANNRDFA GMLAEDIKVR EYLKAKLKNA AVSRILIERP
AKNARITIYS ARPGVVIGKK GEDIENLKKE LASRLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYGTSEAF TTYGVIGLKV WVYKGDTLGR NDLPAVETPR PEEERRPRGP RRDGRPGGDR
AGAGRGPRRP MGGNAAPADG SDKPAGAGGT DATAVKRVRK VDAPATAADG KGE
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