| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0342 |
|---|
| Symbol | rpsS |
|---|
| ID | 4668195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 372920 |
|---|
| End bp | 373198 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639821548 |
|---|
| Product | 30S ribosomal protein S19 |
|---|
| Protein accession | YP_968723 |
|---|
| Protein GI | 120609045 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0185] Ribosomal protein S19 |
|---|
| TIGRFAM ID | [TIGR01050] ribosomal protein S19, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0483388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000267992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGTT CTCTCAAAAA GGGTCCGTTT GTTGACCACC ACTTGCTGGC CAAGGTCGAG
AAGGCCGTCG CCACCAAGGA CAAGAAGCCA GTCAAGACCT GGTCGCGCCG CTCCATGGTC
CTGCCCGAGT TCATCGGCCT GACCATCGCC GTCCACAACG GCAAGCAGCA CGTGCCTGTC
TATATCACCG ACCAGATGGT GGGCCACAAG CTGGGCGAAT TCGCCCTGAC GCGCACCTTC
AAGGGTCACC CCGCGGACAA GAAGGTCCAG AAGAAGTAA
|
|---|
| Protein sequence | MTRSLKKGPF VDHHLLAKVE KAVATKDKKP VKTWSRRSMV LPEFIGLTIA VHNGKQHVPV
YITDQMVGHK LGEFALTRTF KGHPADKKVQ KK
|
|---|
| |