| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0339 |
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| Symbol | rplD |
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| ID | 4668794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 371153 |
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| End bp | 371773 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639821545 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_968720 |
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| Protein GI | 120609042 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000198449 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000274158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAGCTCG AACTCCTGAA TGACCAAGGC CAGGCCGCGT CCAAGATCGA CGTGCCCGAA
ACCGTGTTCG ATCGCCAGTA CAACGAAGAC CTGATCCACC AGATCGTCGT GGCCTACCGC
GCCAACGCCC GCCAGGGCAC CCGCGCGCAG AAGGACCGCG AACAGGTTCG TCACTCGACC
AAGAAGCCCT TCAAGCAAAA GGGCACCGGC AACGCACGTG CCGGTATGAC CTCCTCGCCG
CTGTGGCGTG GGGGCGGTCG CATCTTCCCG AACCTGCCTG AAGAAAACTT CACGCAGAAG
ATCAACAAGA AGATGTACCG CGCCGGCATG GCGTCCATCC TGTCGCAGCT GGCCCGCGAA
GGCCGCCTGG CCGTGGTGGA CTCGCTGAAG GTGGAAACGC CCAAGACCAA GGTGCTGGCC
GACAAGTTCA AGGCCATGAA CCTGCAATCG GTGATGGTGA TCTCCGATGA AGTGGACGAA
AACCTGTACC TCGCTTCCCG CAACCTGAAG AACGTGTTCG TCGTCGAACC GCGCTATGCA
GATCCGGTGT CGCTGGTGCA TTACAAGAAA GTGCTCGTCA CCAAGGGCGC TATCGACAAA
CTCAAGGAGA TGTTCGCATG A
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| Protein sequence | MQLELLNDQG QAASKIDVPE TVFDRQYNED LIHQIVVAYR ANARQGTRAQ KDREQVRHST
KKPFKQKGTG NARAGMTSSP LWRGGGRIFP NLPEENFTQK INKKMYRAGM ASILSQLARE
GRLAVVDSLK VETPKTKVLA DKFKAMNLQS VMVISDEVDE NLYLASRNLK NVFVVEPRYA
DPVSLVHYKK VLVTKGAIDK LKEMFA
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