| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0337 |
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| Symbol | rpsJ |
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| ID | 4669405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 369908 |
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| End bp | 370219 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639821543 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_968718 |
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| Protein GI | 120609040 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0012954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000295628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGTCCAAGC AAAAGATCCG TATCCGCCTG AAGGCTTTCG ATTACAAGCT GATCGACCAG
TCCGCCGCCG AGATCGTCGA TACCGCCAAG CGCACCGGCG CCATCGTCAA GGGCCCCGTG
CCCCTGCCGA CGCGCATGAA GCGTTTCGAC ATCCTGCGCT CGCCCCACGT CAACAAGACG
TCGCGCGACC AGTTCGAAAT CCGCACGCAC CAGCGCCTGA TGGATATCGT CGATCCCACC
GACAAGACGG TTGACGCGCT GATGAAGCTC GACCTGCCGG CTGGCGTGGA CGTCGAGATC
AAGCTGCAGT AA
|
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| Protein sequence | MSKQKIRIRL KAFDYKLIDQ SAAEIVDTAK RTGAIVKGPV PLPTRMKRFD ILRSPHVNKT
SRDQFEIRTH QRLMDIVDPT DKTVDALMKL DLPAGVDVEI KLQ
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