| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0333 |
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| Symbol | rpsL |
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| ID | 4665964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 365240 |
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| End bp | 365617 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639821539 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_968714 |
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| Protein GI | 120609036 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00769915 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TCAACCAGCT CGTGCGTCAG GGGCGCGAGG TCGAAACGAC CAAGTCCAAG
AGCCCCGCGA TGCAAAACTC TCCCCAGCGC CGTGGCGTGT GCACCCGTGT GTACACCACG
ACGCCCAAGA AGCCGAACTC CGCTCTGCGG AAGGTCGCCA AGGTGCGCCT GACCAACGGC
TTCGAAGTCA TCTCCTACAT CGGCGGCGAA GGCCACAACC TGCAGGAACA CAGCGTGGTG
CTGGTCCGCG GCGGCCGTGT GAAGGATCTG CCCGGTGTGC GTTACCACAT CGTGCGCGGC
TCGCTTGACC TGCAAGGCGT CAAGGACCGC AAGCAGGCCC GTTCCAAGTA CGGTGCCAAG
AAGCCCAAGG CCAAGTAA
|
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| Protein sequence | MPTINQLVRQ GREVETTKSK SPAMQNSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQARSKYGAK
KPKAK
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