Gene Aave_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0323 
Symbol 
ID4669406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp355692 
End bp357362 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content73% 
IMG OID639821529 
ProductFis family transcriptional regulator 
Protein accessionYP_968704 
Protein GI120609026 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.362622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TTCTGGCTCC TTCCTCCTCC GTTGCGGCGG TGCCGCATGC GCAGCCGGCT 
GGCGATGCCG CAGGACCCCG CTGGCAGGCG GTGGCGCTCT ACGCCGGCAC GCTGGCCTTT
GCGCTGCTGG GGCTGACGGC CTGCGCCGAC ATGTCCGGCA TCGCGCCCCG GTCGCAGATG
CGCGACGCGG CCTCCCTGGG TCTCGCCGCG CATGCCGAGG GCGTGGCCGA TGCTGCGCGC
GCCTTCGCCG ACCCGGCCGT GGCATCCGAC TGGTGGCGTG GTTTCGGCGA CGCGCAGCTG
GATGCACTCA TCGAGCAGGC CTTGTCCCAG AGCCCCGACC TGAAGCTCGC CGAAGCGCGC
ATCGCCCGGG CACAGGCTTT CACGGAAGGC ACGCGCGCCG CCGACCGCCC GCAGGTCAAT
GGCAGCCTGG ACGCCACCCG CCAGCGCTAC AGCTCCAATT CCATCTATCC GCCTCCCCTG
GGCGGCAGCA CGAAAAACAG CGCCACGGGG CGCCTCACGG GGAGCTGGGA GCTGGACTTC
TTCGGCAAGA ACCGCGCGGC CATCGACGCC GCAGTGGGCA GCGCCAACGC GGCCATCGCC
GACGCGCAGG CCGCCCGGGT GCTGCTGGCT TCCAACGTGG TGCGGCAGTA CGTGGAACTC
GCACGGGTGG AGGCCCAGCT CGGCGTGGCG CAGCGCACGC TGGAACAGCG CACCCAGACC
CTGGCGCTGG TGCGCGATCG CGTGGCGGCC GGCCTGGACA CGCGGCTGGA AGAGCGCCAG
AGCGAAGGCA GCCTGCCCGA GGCGCGCCAG CAGATCGAGG CGCTGCGCGA GCAGGCGGCC
ATGGCGCGCA ATGCGCTGGA CGCGCTGGTG GGGCAGCCCG GTGCCGCGCA GGCCCTGGTG
CCGCCGCCAC TGTCGTCCCT GCATGCCATC GCCCTGCCCG CCGCACTGCC CGCGGACCTG
CTGGGCCGGC GCGCGGATAT CGCCGCCGCG CGCTGGCGCG TGGAAGCCGC CACGCAGGAC
GTGGCCATGG CGAAGGCACA GTTCTATCCC AACGTGAGCC TCACGGCCTT CGTGGGCCTG
GCATCGCTGG GGCTGGACAA CTTCGTCAAG GGCGGCAGCC GCGAATGGGG CGTGGGCCCG
GCCATCCGCC TGCCGATCTT CGAGGCGGGC CGGCTGCGCG CCAACCTGCG CGGCAAGGCC
GCCGACGTGG ATGCCGCCGT CGAGAGCTAC AACGCCACCC TGCTGGACGC GCTGCACGAG
GCAGCCGGCC AGTCCGCCAC GCTCACGGCC GATCTCTACG GCAGCAAGGT GGAGTACACG
GGCAAGGTCG TCGGGCTGGG CGTGGGCACG GGCGCGGCGT TCGCGCTGCT GCCCGCGCAG
AACGCCACCG GCAACTGGAT CAAGGTGGTG CAGCGCGTGC CCGTGCGCAT CGCCCTGGAT
GCCGAGCAGC TCAAGGGCCA TCCGCTGCGC GTGGGCCTGT CCATGGACGT CACGGTGAAC
ACCCAGGACC GCACAGGCGC ACTGCTGGCG GACGCGCCGC GTGCCGAGGC GGTGGCGCAG
ACGGCCGTGT ATGCCGGCCT GGACAGGGGT GCCGACGAAG AAGTGGCCCG CATCGTCGCA
GCCAATGCAG GGCCGGCCCC CCGTGCCGGC AGCCGGACGC AGGCCCACTG A
 
Protein sequence
MKNLLAPSSS VAAVPHAQPA GDAAGPRWQA VALYAGTLAF ALLGLTACAD MSGIAPRSQM 
RDAASLGLAA HAEGVADAAR AFADPAVASD WWRGFGDAQL DALIEQALSQ SPDLKLAEAR
IARAQAFTEG TRAADRPQVN GSLDATRQRY SSNSIYPPPL GGSTKNSATG RLTGSWELDF
FGKNRAAIDA AVGSANAAIA DAQAARVLLA SNVVRQYVEL ARVEAQLGVA QRTLEQRTQT
LALVRDRVAA GLDTRLEERQ SEGSLPEARQ QIEALREQAA MARNALDALV GQPGAAQALV
PPPLSSLHAI ALPAALPADL LGRRADIAAA RWRVEAATQD VAMAKAQFYP NVSLTAFVGL
ASLGLDNFVK GGSREWGVGP AIRLPIFEAG RLRANLRGKA ADVDAAVESY NATLLDALHE
AAGQSATLTA DLYGSKVEYT GKVVGLGVGT GAAFALLPAQ NATGNWIKVV QRVPVRIALD
AEQLKGHPLR VGLSMDVTVN TQDRTGALLA DAPRAEAVAQ TAVYAGLDRG ADEEVARIVA
ANAGPAPRAG SRTQAH