Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0323 |
Symbol | |
ID | 4669406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 355692 |
End bp | 357362 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639821529 |
Product | Fis family transcriptional regulator |
Protein accession | YP_968704 |
Protein GI | 120609026 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.362622 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC TTCTGGCTCC TTCCTCCTCC GTTGCGGCGG TGCCGCATGC GCAGCCGGCT GGCGATGCCG CAGGACCCCG CTGGCAGGCG GTGGCGCTCT ACGCCGGCAC GCTGGCCTTT GCGCTGCTGG GGCTGACGGC CTGCGCCGAC ATGTCCGGCA TCGCGCCCCG GTCGCAGATG CGCGACGCGG CCTCCCTGGG TCTCGCCGCG CATGCCGAGG GCGTGGCCGA TGCTGCGCGC GCCTTCGCCG ACCCGGCCGT GGCATCCGAC TGGTGGCGTG GTTTCGGCGA CGCGCAGCTG GATGCACTCA TCGAGCAGGC CTTGTCCCAG AGCCCCGACC TGAAGCTCGC CGAAGCGCGC ATCGCCCGGG CACAGGCTTT CACGGAAGGC ACGCGCGCCG CCGACCGCCC GCAGGTCAAT GGCAGCCTGG ACGCCACCCG CCAGCGCTAC AGCTCCAATT CCATCTATCC GCCTCCCCTG GGCGGCAGCA CGAAAAACAG CGCCACGGGG CGCCTCACGG GGAGCTGGGA GCTGGACTTC TTCGGCAAGA ACCGCGCGGC CATCGACGCC GCAGTGGGCA GCGCCAACGC GGCCATCGCC GACGCGCAGG CCGCCCGGGT GCTGCTGGCT TCCAACGTGG TGCGGCAGTA CGTGGAACTC GCACGGGTGG AGGCCCAGCT CGGCGTGGCG CAGCGCACGC TGGAACAGCG CACCCAGACC CTGGCGCTGG TGCGCGATCG CGTGGCGGCC GGCCTGGACA CGCGGCTGGA AGAGCGCCAG AGCGAAGGCA GCCTGCCCGA GGCGCGCCAG CAGATCGAGG CGCTGCGCGA GCAGGCGGCC ATGGCGCGCA ATGCGCTGGA CGCGCTGGTG GGGCAGCCCG GTGCCGCGCA GGCCCTGGTG CCGCCGCCAC TGTCGTCCCT GCATGCCATC GCCCTGCCCG CCGCACTGCC CGCGGACCTG CTGGGCCGGC GCGCGGATAT CGCCGCCGCG CGCTGGCGCG TGGAAGCCGC CACGCAGGAC GTGGCCATGG CGAAGGCACA GTTCTATCCC AACGTGAGCC TCACGGCCTT CGTGGGCCTG GCATCGCTGG GGCTGGACAA CTTCGTCAAG GGCGGCAGCC GCGAATGGGG CGTGGGCCCG GCCATCCGCC TGCCGATCTT CGAGGCGGGC CGGCTGCGCG CCAACCTGCG CGGCAAGGCC GCCGACGTGG ATGCCGCCGT CGAGAGCTAC AACGCCACCC TGCTGGACGC GCTGCACGAG GCAGCCGGCC AGTCCGCCAC GCTCACGGCC GATCTCTACG GCAGCAAGGT GGAGTACACG GGCAAGGTCG TCGGGCTGGG CGTGGGCACG GGCGCGGCGT TCGCGCTGCT GCCCGCGCAG AACGCCACCG GCAACTGGAT CAAGGTGGTG CAGCGCGTGC CCGTGCGCAT CGCCCTGGAT GCCGAGCAGC TCAAGGGCCA TCCGCTGCGC GTGGGCCTGT CCATGGACGT CACGGTGAAC ACCCAGGACC GCACAGGCGC ACTGCTGGCG GACGCGCCGC GTGCCGAGGC GGTGGCGCAG ACGGCCGTGT ATGCCGGCCT GGACAGGGGT GCCGACGAAG AAGTGGCCCG CATCGTCGCA GCCAATGCAG GGCCGGCCCC CCGTGCCGGC AGCCGGACGC AGGCCCACTG A
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Protein sequence | MKNLLAPSSS VAAVPHAQPA GDAAGPRWQA VALYAGTLAF ALLGLTACAD MSGIAPRSQM RDAASLGLAA HAEGVADAAR AFADPAVASD WWRGFGDAQL DALIEQALSQ SPDLKLAEAR IARAQAFTEG TRAADRPQVN GSLDATRQRY SSNSIYPPPL GGSTKNSATG RLTGSWELDF FGKNRAAIDA AVGSANAAIA DAQAARVLLA SNVVRQYVEL ARVEAQLGVA QRTLEQRTQT LALVRDRVAA GLDTRLEERQ SEGSLPEARQ QIEALREQAA MARNALDALV GQPGAAQALV PPPLSSLHAI ALPAALPADL LGRRADIAAA RWRVEAATQD VAMAKAQFYP NVSLTAFVGL ASLGLDNFVK GGSREWGVGP AIRLPIFEAG RLRANLRGKA ADVDAAVESY NATLLDALHE AAGQSATLTA DLYGSKVEYT GKVVGLGVGT GAAFALLPAQ NATGNWIKVV QRVPVRIALD AEQLKGHPLR VGLSMDVTVN TQDRTGALLA DAPRAEAVAQ TAVYAGLDRG ADEEVARIVA ANAGPAPRAG SRTQAH
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