Gene Aave_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0319 
Symbol 
ID4669658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp351782 
End bp352417 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID639821525 
Productmultiple antibiotic resistance (MarC)-related protein 
Protein accessionYP_968700 
Protein GI120609022 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCA AACCCCTCAT CACCCTGCTG GCCATCGTGA ACCCGCTGGC CATCGTGCCC 
TTCTTCATCC ACTACACCGA CGGTTTCTCG CCGCGGCAGC GGCGGCGCAC CATCCAGGTG
GCGGCCTTCA GCGCGTTCTG CGTCATCGCG GCCTGCGCGC TGCTGGGCCT GCAAATCCTG
GAGTTCTTCA ACATTTCGCT GCAGAGCTTC CAGGTGGGCG GCGGCATGCT GCTGCTCATC
AGCGCGATGA ACATGCTCAA CGCCCAGCCC GCGGAAGCGA AACCGCACAC GCACGAACTG
GAAGAAGGCG CCGAGAAGGC CGCCCAGGGC GACAGCATCG CCGTGGTGCC GCTCACCATC
CCGCTGCTCA CCGGGCCCGC GAGCATGTCC ACCGTGGTGA TCTATGCCGA CCGGGCGCAG
ACCGTCTGGC AGCATCTCGC TCTGGTGGGC TACGGTGTGG TGATCGCCCT GGCCACGGCG
GTGTGCTTCG CGCTCGCCGA CCCGATCGCG CGCGTGCTGG GCAAGACCGG CATCAACGTG
ATGACGCGGC TCATGGGCCT GATCCTGGCC GCGCTGGCCG TCGAGGTGAT GGCCGATGGG
CTGGGCAAGC TCTTTCCCGT CCTGGTGGCG CGCTGA
 
Protein sequence
MDLKPLITLL AIVNPLAIVP FFIHYTDGFS PRQRRRTIQV AAFSAFCVIA ACALLGLQIL 
EFFNISLQSF QVGGGMLLLI SAMNMLNAQP AEAKPHTHEL EEGAEKAAQG DSIAVVPLTI
PLLTGPASMS TVVIYADRAQ TVWQHLALVG YGVVIALATA VCFALADPIA RVLGKTGINV
MTRLMGLILA ALAVEVMADG LGKLFPVLVA R