Gene Aave_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0296 
Symbol 
ID4669687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp328018 
End bp328536 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content70% 
IMG OID639821502 
Productputative rod shape-determining MreD transmembrane protein 
Protein accessionYP_968677 
Protein GI120608999 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGC CCCGCGGCGA ACAGTTGCTG CTGCCGGTGC GCCCTGCCTT CATCGCGGCC 
AGCCTGCTGG TGGCGCTGGC GTTCAACATG CTGCCGCTGG GGCGCTTGGT GTGGACGCCC
GACCTCGTCA TGGTGCTGCT CGTCTTCTGG GGCGTGCACC AGCCCCAGCG CGTGGGCATG
GCCGTCGCCT TCGCCATGGG CCTGTGCATG GACGTCTACC AGACCGCGCT GCTGGGGCAG
CATGCGCTGG CCTACTGCGC CATGATGTTC GGCGCCATCT ACCTGCACCG GCGCCTGCTG
TGGTTCAGCC CGTTCTCGCA GGCGCTGCAG GTGCTGCCCC TGTTCCTGGC CGCGCATGCG
ATCGAACTGC TGGTGCGCAT GGTGTCGGGC GGCATCCTGC CCGGGCTGCC GGGGCTGATC
TCGCCCGTGA TCGAGGCCCT GCTGTGGCCG CTCGCCAGTT GGGTGCTGCT CGCGCCGCAG
CGCCTGCCGC CCGACCGCGA CGAGAACCGG CCGCTCTGA
 
Protein sequence
MIMPRGEQLL LPVRPAFIAA SLLVALAFNM LPLGRLVWTP DLVMVLLVFW GVHQPQRVGM 
AVAFAMGLCM DVYQTALLGQ HALAYCAMMF GAIYLHRRLL WFSPFSQALQ VLPLFLAAHA
IELLVRMVSG GILPGLPGLI SPVIEALLWP LASWVLLAPQ RLPPDRDENR PL