Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0255 |
Symbol | |
ID | 4668156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 284389 |
End bp | 285984 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639821461 |
Product | extracellular solute-binding protein |
Protein accession | YP_968636 |
Protein GI | 120608958 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.146115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGATTTT CCCGCACCCT TCTGGCGGCC TCCCTCGCGG CCGCGCTCAC GGCGGCCCTG CCGCTGGCCA CGCAGGCCGC CACCTTCCGC TTCGCCCGTT CGGCCGACGT GACCACCTGG GACGTGCATG CCCACAACGT GGGCCCGAAC AACGTGCTGC ATTCGGCCGT GTACGAGACG CTGGTCGAAT ACAACAGCAA GACCTTCAAG CCCGAGCCGC AGCTGGCCAC CGCCTGGAAG CAGGTGAGCC CGACGCAGCT GCGCCTCACC CTGCGCCAGG GCGTGAAGTT CAGCGACGGC TCGCCGCTCA CGGCCGAGGA CGTGAAGTTC TCGCTGGAGC GCGCGAAGGC CAAGACCTCC AACTACGCGG TGTACGCGCA GGGCATCGAC CGCGTGCAGG TGGTGGATGC GCAGACGATC GACATCTTCT CGGACGTGCC CAACCCCGTG CTGGTGAACC AGCTCACCGA GCTGCGCATC CTGAGCAAGC CCTGGGCCGA GAAGAACAAC GCCCTCACGC CCAAGGACAT CAAGACCAGC GACGAGCCCT ACACCCACCG CAATGCGCTC GGCACGGGGC CGTTCGTGCT CAAGTCGTGG TCGCCCGACC AGCGCACCGT GCTCGCGGCC AACCCCTACT GGTGGGGCAA GGGCAAATTC GCAGGCAACG TGACCGATGT GGTCTATACC CCGATCAAGT CCGATGCGAC CCGCACCGCG GCGCTGCTGT CGGGCGAGGT GGACTTCGTG CTCGATCCCA GCCCGCAGGA TATCGCCCGC GTGCGCCAGA CGCCGGGCTT CAAGGTGCTG GAAGGCCCGG AAAACCGCAC GCTGTTCCTG GGCCTGGACC AGTTCCGCGA GGAGCTGCCC GGATCGAACG TGAAGGGAAA GAACCCGCTC AAGGACGTGC GCGTGCGCCG CGCCCTCTGC CAGGCGATCG ACATCCAGAC CATCCAGCGC GTGACGCTGC GCGGCCTCGC GCAGCCCACG GGCGCGCTGA TCGCGCGGCA GGTCAACGGC TGGACGCAGA AGGCCGATGC GCGCTGGCCC TACGACCCCG CCGCCGCGCA GAAGCTGCTG GCCGACGCGG GCTATCCGCA GGGCTTCGAG GTCGATTTCG CGTGCAGCGC GGGCCGCTAC ACGAACGACG AGCAGCTCTG CCAGGCGATC ACGGCGCAAT GGGCCAAGGT GGGCGTGCGC GCCAAGCTGC GCACCCAGCC GTTCGCCACG TATTTCCCGA TGATCCAGCG CAACGAGGCC AGCATCTACC TGCTGGGCTG GGGCGTGCCG ACCTTCGACG CGTTCTATTC GCTGCAGTCG CTGGTCCGCT CGCCCGGCGC GGGCGGCGAC GGCAATTTCA ACCTGGGCCG CTTCTCCGAT CCGCAGCAGG ACGCTTTGAT CGAGCGCATC AAGAAGGAAA CCGATGCCGC CACGCGCAAC GGCCTCATCG AGCAGGCCCT GCTGAAGGAC CACGAGCTGG TCTCGCACAT CCCGCTCTAC AACCAGATCA TTCCCTGGGC CGCCACCCTG AAGGTGGAAC TGCCGCACCG CGCCGACAAC CGCATCGACT GGCGCGTGCT GAAGGTGGCG AAGTAA
|
Protein sequence | MRFSRTLLAA SLAAALTAAL PLATQAATFR FARSADVTTW DVHAHNVGPN NVLHSAVYET LVEYNSKTFK PEPQLATAWK QVSPTQLRLT LRQGVKFSDG SPLTAEDVKF SLERAKAKTS NYAVYAQGID RVQVVDAQTI DIFSDVPNPV LVNQLTELRI LSKPWAEKNN ALTPKDIKTS DEPYTHRNAL GTGPFVLKSW SPDQRTVLAA NPYWWGKGKF AGNVTDVVYT PIKSDATRTA ALLSGEVDFV LDPSPQDIAR VRQTPGFKVL EGPENRTLFL GLDQFREELP GSNVKGKNPL KDVRVRRALC QAIDIQTIQR VTLRGLAQPT GALIARQVNG WTQKADARWP YDPAAAQKLL ADAGYPQGFE VDFACSAGRY TNDEQLCQAI TAQWAKVGVR AKLRTQPFAT YFPMIQRNEA SIYLLGWGVP TFDAFYSLQS LVRSPGAGGD GNFNLGRFSD PQQDALIERI KKETDAATRN GLIEQALLKD HELVSHIPLY NQIIPWAATL KVELPHRADN RIDWRVLKVA K
|
| |