Gene Aave_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0255 
Symbol 
ID4668156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp284389 
End bp285984 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content67% 
IMG OID639821461 
Productextracellular solute-binding protein 
Protein accessionYP_968636 
Protein GI120608958 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.146115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTT CCCGCACCCT TCTGGCGGCC TCCCTCGCGG CCGCGCTCAC GGCGGCCCTG 
CCGCTGGCCA CGCAGGCCGC CACCTTCCGC TTCGCCCGTT CGGCCGACGT GACCACCTGG
GACGTGCATG CCCACAACGT GGGCCCGAAC AACGTGCTGC ATTCGGCCGT GTACGAGACG
CTGGTCGAAT ACAACAGCAA GACCTTCAAG CCCGAGCCGC AGCTGGCCAC CGCCTGGAAG
CAGGTGAGCC CGACGCAGCT GCGCCTCACC CTGCGCCAGG GCGTGAAGTT CAGCGACGGC
TCGCCGCTCA CGGCCGAGGA CGTGAAGTTC TCGCTGGAGC GCGCGAAGGC CAAGACCTCC
AACTACGCGG TGTACGCGCA GGGCATCGAC CGCGTGCAGG TGGTGGATGC GCAGACGATC
GACATCTTCT CGGACGTGCC CAACCCCGTG CTGGTGAACC AGCTCACCGA GCTGCGCATC
CTGAGCAAGC CCTGGGCCGA GAAGAACAAC GCCCTCACGC CCAAGGACAT CAAGACCAGC
GACGAGCCCT ACACCCACCG CAATGCGCTC GGCACGGGGC CGTTCGTGCT CAAGTCGTGG
TCGCCCGACC AGCGCACCGT GCTCGCGGCC AACCCCTACT GGTGGGGCAA GGGCAAATTC
GCAGGCAACG TGACCGATGT GGTCTATACC CCGATCAAGT CCGATGCGAC CCGCACCGCG
GCGCTGCTGT CGGGCGAGGT GGACTTCGTG CTCGATCCCA GCCCGCAGGA TATCGCCCGC
GTGCGCCAGA CGCCGGGCTT CAAGGTGCTG GAAGGCCCGG AAAACCGCAC GCTGTTCCTG
GGCCTGGACC AGTTCCGCGA GGAGCTGCCC GGATCGAACG TGAAGGGAAA GAACCCGCTC
AAGGACGTGC GCGTGCGCCG CGCCCTCTGC CAGGCGATCG ACATCCAGAC CATCCAGCGC
GTGACGCTGC GCGGCCTCGC GCAGCCCACG GGCGCGCTGA TCGCGCGGCA GGTCAACGGC
TGGACGCAGA AGGCCGATGC GCGCTGGCCC TACGACCCCG CCGCCGCGCA GAAGCTGCTG
GCCGACGCGG GCTATCCGCA GGGCTTCGAG GTCGATTTCG CGTGCAGCGC GGGCCGCTAC
ACGAACGACG AGCAGCTCTG CCAGGCGATC ACGGCGCAAT GGGCCAAGGT GGGCGTGCGC
GCCAAGCTGC GCACCCAGCC GTTCGCCACG TATTTCCCGA TGATCCAGCG CAACGAGGCC
AGCATCTACC TGCTGGGCTG GGGCGTGCCG ACCTTCGACG CGTTCTATTC GCTGCAGTCG
CTGGTCCGCT CGCCCGGCGC GGGCGGCGAC GGCAATTTCA ACCTGGGCCG CTTCTCCGAT
CCGCAGCAGG ACGCTTTGAT CGAGCGCATC AAGAAGGAAA CCGATGCCGC CACGCGCAAC
GGCCTCATCG AGCAGGCCCT GCTGAAGGAC CACGAGCTGG TCTCGCACAT CCCGCTCTAC
AACCAGATCA TTCCCTGGGC CGCCACCCTG AAGGTGGAAC TGCCGCACCG CGCCGACAAC
CGCATCGACT GGCGCGTGCT GAAGGTGGCG AAGTAA
 
Protein sequence
MRFSRTLLAA SLAAALTAAL PLATQAATFR FARSADVTTW DVHAHNVGPN NVLHSAVYET 
LVEYNSKTFK PEPQLATAWK QVSPTQLRLT LRQGVKFSDG SPLTAEDVKF SLERAKAKTS
NYAVYAQGID RVQVVDAQTI DIFSDVPNPV LVNQLTELRI LSKPWAEKNN ALTPKDIKTS
DEPYTHRNAL GTGPFVLKSW SPDQRTVLAA NPYWWGKGKF AGNVTDVVYT PIKSDATRTA
ALLSGEVDFV LDPSPQDIAR VRQTPGFKVL EGPENRTLFL GLDQFREELP GSNVKGKNPL
KDVRVRRALC QAIDIQTIQR VTLRGLAQPT GALIARQVNG WTQKADARWP YDPAAAQKLL
ADAGYPQGFE VDFACSAGRY TNDEQLCQAI TAQWAKVGVR AKLRTQPFAT YFPMIQRNEA
SIYLLGWGVP TFDAFYSLQS LVRSPGAGGD GNFNLGRFSD PQQDALIERI KKETDAATRN
GLIEQALLKD HELVSHIPLY NQIIPWAATL KVELPHRADN RIDWRVLKVA K