| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0241 |
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| Symbol | |
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| ID | 4668682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 269181 |
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| End bp | 271904 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639821447 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_968622 |
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| Protein GI | 120608944 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCATTT CCGGCAGCTG
CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC
CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA
GGCGGCGGCA AGCGGTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC
CATCGGCTGT ATTCGTACCA CCTGCGCCTG CAGCCCTGGC TCTGGGTGGC CACGCGGCGG
CAGGACTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTGCAGGA GGTGCTGGGC
CGCTACGGTT ATCCGCTGCA GTTGAAGCTC ACGCGCGCGT ACCGCGCCTG GGACTACTGC
GTGCAGTACG GCGAGAGCGA CTTCGACTTC GTCTCCCGCC TCTTGGAGCA TGAGGGCGCG
TACTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCCGA CGACATCGTG
GCAGGCCACG AGCCCCTGCC GGGCGCGGCC GTGATCCCGT TCTACCCGCC CGAGAAGTCG
GCCGTGGCCG ACCGCGAGAA CATCCATGCC TGGACGCTGG GCGAGGAGAT CAAGCCCGGC
CGGTACTACA ACGACGACTA CGACTTCAAG AAGCCGAGGT CGGACCTGTC CAACATGCGC
CAGCAGCCCC CGGGCCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC
GTGCAGCACG GCGACGGCGA GCAGTACGCC CGCGTGCGCC TGCAGGAAGG CCTGACCGGG
CACAGCACCG TCAGGGGCGA ATCGCGCCAC AGGAGCCTGG CGCCGGGCTA CACCTTCACG
CTGGAGAACT ACCCGCGCGG CGACCAGAAC CGGCAGTACC TCATCACCGG CGTCACCTAC
CACCTGCACG AGAACCCGCG CAGTTCCTCG TTCAACAGCG CCAAGCCCGG CGAGACGCTC
AAGCACAACG AAGAGCACGG CTCCTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC
CTGCCCTACA CCCCGGCCAG AAAGACCCCC AAACCCCGCA CGACCGGCCC GCAGACCGCC
GTCGTGGTCG GCCCGGCCGG TGAAGAAATC TGGACCGACG AATACGGCCG CATCAAGGTG
CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGCTGCTG GATGCGGGTG
GCGACGAGCT GGGCGGGCTC GGGCTTCGGT GCGATCTCGA TCCCACGCAT TGGCCAAGAA
GTCATAGTGG ATTTCTTGAA CGGCGACCCG GACTACCCGA TCGTCACGGG CAGCGTCTAT
AACGCCGCGA ACATGCCGCC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG
ACGAAGTCCA GCAAGGGCGG GGCGTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC
AACGCGATCC GCTTCGAGGA CAAGAAGGGC GCGGAGCAGG TGTGGCTGCA TGCGCAGAAG
GACCAGCTCA TCGAGGTGGA GAACGATGAG GACCACTGGG TGGGCCAGGA CCGGCGCAAG
ACCATCGACC GGGACGAGAC GAACACCATC CACCGGGACC GCACGGAGAC GGTCGATCGC
AACGAGAAAA TCACGGTGCA TGGCTGGCGC ACCGAGGAAG TGGATGGCGA CGAGACCATC
ACCATCCACT CCAACCGTAC TGAAACGGTG GACCTGGACG AATCCATCAC CATCCACCGC
AACCGCCGCG AACGAGTCGA TCTGGATGAA ACGGTATCGA TCGGCGTGGA CCGCTCGGAA
GACGTGGGCC GCAACGAGCA GGTCTCGATC GGCGCCAATC GGGCCAAGAC CATCGGCAAC
AATGAGAAGG ACCGGATCGG CAGGAACTGG TCCCTGCGCG TGGGCAAGAC CAAGACCGAG
ACCATCGGCC GGATGTCACT GCAGAACGTG GGCATGGCGC GCATGGACAA CGTCGGCCTG
GGCTACAGCC TCAACGTGGG CGTGGCGATG AACACGCTGG TCGGCCTGCA GCAGAGCACC
CAGGTGGGCA GGACCAAGCG CCTCAACGTG GGCGACACCT ATGCCCAGGA CATCGGCAAG
GCCTGGAACC TGCAGGTTGG CCGCACCCAG ACGGTGAACG TGGGTGAGCG CCAGGAAACA
CGCGCCGGCA AGGTGCTCTT CGCCCAGGCG GGCGAACACC TGGAACTGGC CTGCGGCGCG
GCGAAGATCG TGCTGCGCAG CGACGGCGGC ATCTACCTGC AGGGAACGCA CATCGAAATG
CAGGCCAGCG CCGCGATCAA TGGGGACGCC GGCCTCATCG ACCTCAACTG CGGCAGCAGC
CAGCCCGCGC CGGAAACGCC TCCGCCCGCC AGCGATGCGC CCGGTGACGC GGCGCAGCAG
GCCGCCGACG CCGCGGAGAG CCAGGCGGAG TCCGCCGCGA GCGCCGCCAT GGGCAGCGGC
TCCTCGGGCC TGCAAAGCGC CCTCGGCGCG CTCCAGCAGG CCAAGGGACT GCTCGACACC
GCCAAGGCCC TGAAGAACGG CGACCTCGGC GCGATCGCCG GGTTGGCCGG ATTGGCCGGA
GGCATCGCCG GCCCGGGCGG GGCCGGCACC TCTGCCGGCC CTGCGGCCAT GGGCAAAACG
CCGGGCTGGA ACGCCAAGCC CTGA
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| Protein sequence | MTRRVTIRTP LGEQLHFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE
GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG
RYGYPLQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV
AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKPG RYYNDDYDFK KPRSDLSNMR
QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSTVRGESRH RSLAPGYTFT
LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGETL KHNEEHGSFQ KFSLTAQPTS
LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV
ATSWAGSGFG AISIPRIGQE VIVDFLNGDP DYPIVTGSVY NAANMPPWAL PGNATQSGIK
TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQVWLHAQK DQLIEVENDE DHWVGQDRRK
TIDRDETNTI HRDRTETVDR NEKITVHGWR TEEVDGDETI TIHSNRTETV DLDESITIHR
NRRERVDLDE TVSIGVDRSE DVGRNEQVSI GANRAKTIGN NEKDRIGRNW SLRVGKTKTE
TIGRMSLQNV GMARMDNVGL GYSLNVGVAM NTLVGLQQST QVGRTKRLNV GDTYAQDIGK
AWNLQVGRTQ TVNVGERQET RAGKVLFAQA GEHLELACGA AKIVLRSDGG IYLQGTHIEM
QASAAINGDA GLIDLNCGSS QPAPETPPPA SDAPGDAAQQ AADAAESQAE SAASAAMGSG
SSGLQSALGA LQQAKGLLDT AKALKNGDLG AIAGLAGLAG GIAGPGGAGT SAGPAAMGKT
PGWNAKP
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