Gene Aave_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0228 
Symbol 
ID4667082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp254773 
End bp255759 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID639821435 
Producthypothetical protein 
Protein accessionYP_968610 
Protein GI120608932 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT CCCCGTCCCC CCTGCGCCGC GCCCTGCTCG GCGCAACGGT CCTGGCCGCC 
TGCGCCGCGG CCCCCGCGCT GGCCCAGGAC TATCCCGCCA AGACCGTGCG CCTCATCGTG
CCGTTCGCTC CCGGCGGCAC GACCGACATC GTGGCGCGCG TGGTTTCGCA ATCGCTGGGC
ACCACGCTCG GCCAGCCGGT CGTCGTGGAC AACAGGGCCG GCGCGGGCGG CGTGGTCGGC
GCGACGGAAA TCGCCCGCGC AGCGCCGGAC GGCTACACGC TGGGCGTGGC CACGGTGTCC
TCCGTGGCCT CCGCGCCCGC GATCAACCCG GCGGTGAAAT ACAACCCGCT GACGGACTTC
ACCTCGATCA TCAACATGGC GGCCACGCCC AACGTGCTGG CCGTGCACCC GAGCTTCCCG
GCGAAGGACT TCAAGTCGTT CATGACCGAG GTCAAGGCCC ACCCCGGCAA GTACGCGTTC
GCCACCTCCG GCACCGGCGG AATCGGCCAC CTGCAGATGG AGCTGTTCAA GTCGCTGTCC
GGCCTGGGGC TGGAGCACAT CGGGTACAAG GGCGCCGGCC CGGCCCTCAA CGACGCGGTG
GCCGGCCAGG TGCCGATGAT CTTCGACAAC CTGCCGTCCG CGCTGCCGTT CATCAAGGAG
AAGCGGCTCA TCGCGATCGC GGTGGCGGCG CCGCAGCGCC TGCCCTCGAT GCCCGACGTG
CCCACCTTCA AGGAAGTCGG CTTCGAGCCC GTGAACCGGA TGGCGTTCTA CGGCATCCAC
GGTCCGAAGA ACCTGCCGCG CGAAGTGGTG GACAAGATCT CGCAGGCCGT GAAGAAGACC
CTGGAAGACC CGGCCGTGCG CCAGCGCATC GAGGATACGG GCTCGCTCGT CGTGGGGAAC
ACGCCGGAGG AGTTCACGGC GCAGACCAAG GCCGAGTACG AGCTCTACAA AGGCGTGGTG
GCCAAGCAGA AGCTCAAGCT CGACTGA
 
Protein sequence
MKHSPSPLRR ALLGATVLAA CAAAPALAQD YPAKTVRLIV PFAPGGTTDI VARVVSQSLG 
TTLGQPVVVD NRAGAGGVVG ATEIARAAPD GYTLGVATVS SVASAPAINP AVKYNPLTDF
TSIINMAATP NVLAVHPSFP AKDFKSFMTE VKAHPGKYAF ATSGTGGIGH LQMELFKSLS
GLGLEHIGYK GAGPALNDAV AGQVPMIFDN LPSALPFIKE KRLIAIAVAA PQRLPSMPDV
PTFKEVGFEP VNRMAFYGIH GPKNLPREVV DKISQAVKKT LEDPAVRQRI EDTGSLVVGN
TPEEFTAQTK AEYELYKGVV AKQKLKLD