Gene Aave_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0117 
Symbol 
ID4669085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp129026 
End bp129853 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID639821328 
Productpeptidase M48, Ste24p 
Protein accessionYP_968503 
Protein GI120608825 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGT TCCGCCTGGG CGCGCTTGCG CTCTCCCTGA TCCTGGCCGG TTGCGCCACC 
AACGGCTCCA CGGGGTCGTC CTCTTCCGCC GGCTCTGCCC TCGGCTCCGT GCTGGGGGCC
GCGGGCTCGG GTGGCACCGG TTCCAGCACC GAAAGCAAGA TCGGCGCGGC CGCGGACGTA
TTCAAGGCGG TGACGGTGTC CGACGACGAA CTCAAGTCCG TGTCGCAGCA GTTCCGCGCC
TACGAAGAGC GCACGGAGAA GGTCGCGCCG GCCAAGAACA AATACGCCCA GCGCCTTGCC
CGCCTGACGA AGAAGCACGT CAACGAGGAC GGCATGAAGC TCAACTTCAA GGTCTATCTC
GCCAACGAAG TCAATGCCGA TGCCACGGCC GACGGCTCCA TCCGCGTCTA CAGCGGCCTG
ATGGACATGA TGAACGACCA GGAACTGCTG GGCGTGATCG GCCACGAGAT CGGCCACGTG
AAGCTGCAGC ACTCCCTGGC CGCCATGCGC ACCGCCTACC TCGCCTCGGC GGGCCGCAAG
GCCGCCTCCG CGGCCGGCGG CGTGGGCCGC CTCGCCGACA GCGACCTGGG CGCGCTGGGC
GAGAAGCTTG TCAACAGCCA GTTCTCGCAG AGCCAGGAGA CGGCCGCCGA CGACTACGGC
CTGGCCTTCA TGAAGAAGCA CAAGTACAAG GTGAGCGCGA TGGAATCGGC CTTCCGCAAG
CTGGCGGCCC AGAGCGGCGG CAAGGGCGGC GCGCTCGACG AGATGCTGTC GTCCCATCCG
GACCCGGCCG GCCGCGCCGA CCGCATGCGC GACATGGCTT CCAAGTGA
 
Protein sequence
MNTFRLGALA LSLILAGCAT NGSTGSSSSA GSALGSVLGA AGSGGTGSST ESKIGAAADV 
FKAVTVSDDE LKSVSQQFRA YEERTEKVAP AKNKYAQRLA RLTKKHVNED GMKLNFKVYL
ANEVNADATA DGSIRVYSGL MDMMNDQELL GVIGHEIGHV KLQHSLAAMR TAYLASAGRK
AASAAGGVGR LADSDLGALG EKLVNSQFSQ SQETAADDYG LAFMKKHKYK VSAMESAFRK
LAAQSGGKGG ALDEMLSSHP DPAGRADRMR DMASK