| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0095 |
|---|
| Symbol | |
|---|
| ID | 4669462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 100304 |
|---|
| End bp | 101728 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639821307 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_968482 |
|---|
| Protein GI | 120608804 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CCACCGCCAC CGCCCACCTG CTGCCCGAGA TCCGACTGCG CCCCGTGCCG
CAGGCCTTCA TGGACGCGTT GCAGGCACGA TTCGGCACCC AGTGCTCGCT GGCCCAGGCC
GTGCGCGAGC AGCATGGGCG CGACGAAGGC TCGATGCAGG CGCCGCCGCC CTCGGCCGTG
GTCTTCGCCG AGAGCACGCA GGACGTGGCC GATGCCGTGC GCCTCGCCGC GCAGCACGAC
GTGCCCGTCA TTCCGTACGG CGCGGGCTCC TCGCTCGAAG GCCACCTGCT CGCCATCCAG
GGCGGCATCA GCATCGACGT CTCGCGCATG AACCGCCTGC TGAGCGTGGA TGCCGACGAC
CTTACCGTGA CCGTGCAGCC GGGCATCACG CGCAAGCAGC TCAACGAGGC GATCAAGGAC
ACGGGCCTGT TCTTCCCCAT CGACCCGGGC GCGGATGCCA GCATCGGCGG CATGGCCGCC
ACGCGCGCCA GCGGCACCAA CGCCGTGCGC TACGGCACCA TGCGCGAGAA CGTGCTCGCG
CTCGAAGTGG TGACCGCCGC GGGCGAGGCC ATCCGCACCG GCACCCGCGC CAAGAAGAGC
GCCGCCGGCT ACGACCTGAC GCGCCTGCTG GTGGGCAGCG AAGGCACGCT GGGCGTCATC
ACCGAAGTGA CCCTGCGCCT TTACCCGCTG CCCGAGGCCG TGAGCGCCGC CATCTGCTCC
TTCCCGAGCA TCGAGGCCGC CGTGCGCACC GTCATCCAGA CCATCCAGCT GGGCGTGCCC
ATCGCCCGCG TGGAACTGAT CGACGCGCAC ACCGTGCGCA TGGTGAACGC CCACAGCAAG
CTCGGCCTGC GCGAGGAACC CATGCTGCTG ATGGAATTCC ACGGCTCGCC CGCCGGCGTG
CAGGAACAGG CCGAAACCGT GCAATCCATC GCACAGGAAT GGAACGGCAA CGCCTTCGAA
TGGGCCACCA CACCCGAGGA ACGCACGCGC CTGTGGACCG CGCGGCACAA CGCCTACTTC
GCCGCCGTGC AGAGCCGCCC CGGCTGCCGC GCCATCAGCA CCGACACCTG CGTGCCCATC
AGCCGCCTGG CCGACTGCCT GCTCGATTCC GTGACCGAGG CCGACGCCAG CGGCATCCCC
TACTTCCTCG TCGGCCACGT GGGCGACGGC AACTTCCACT TCGGCTACCT GATCGACCCC
GACAGCGACG ACGAGCGCAT GGTGGCCGAG CGGCTCAACC ACCAGCTCGT CGCACGGGCG
CTGGCCATGG GCGGCACCTG CACGGGCGAG CACGGCGTGG GCATCCACAA GATGGGGTTC
CTGCTGGACG AGACCGGGCC GGGGGCCGTG GGGATGATGC GGGCGATCAA GCAGGCGCTG
GATCCGAAGA ACATTTTGAA TCCGGGGAAG ATTTTCGAGA TGTGA
|
|---|
| Protein sequence | MNAPTATAHL LPEIRLRPVP QAFMDALQAR FGTQCSLAQA VREQHGRDEG SMQAPPPSAV
VFAESTQDVA DAVRLAAQHD VPVIPYGAGS SLEGHLLAIQ GGISIDVSRM NRLLSVDADD
LTVTVQPGIT RKQLNEAIKD TGLFFPIDPG ADASIGGMAA TRASGTNAVR YGTMRENVLA
LEVVTAAGEA IRTGTRAKKS AAGYDLTRLL VGSEGTLGVI TEVTLRLYPL PEAVSAAICS
FPSIEAAVRT VIQTIQLGVP IARVELIDAH TVRMVNAHSK LGLREEPMLL MEFHGSPAGV
QEQAETVQSI AQEWNGNAFE WATTPEERTR LWTARHNAYF AAVQSRPGCR AISTDTCVPI
SRLADCLLDS VTEADASGIP YFLVGHVGDG NFHFGYLIDP DSDDERMVAE RLNHQLVARA
LAMGGTCTGE HGVGIHKMGF LLDETGPGAV GMMRAIKQAL DPKNILNPGK IFEM
|
|---|
| |