Gene Aave_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0093 
Symbol 
ID4669410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp99449 
End bp99970 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID639821305 
Producttransposase, IS4 family protein 
Protein accessionYP_968480 
Protein GI120608802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCTGG GCGAGCATCG ATGGCTCGTC GGTGCCAAGC CCCCGGGGGG CCAGGAAACG 
GGCCCCAACC CCACGGACAG GGGAAAACTC GGCTCCAAGC GGCACATCGT CGTAGACGCG
CGGGGCATTC CGCTGGTGGT GCTGGTCAGC GGAGCGAACC GGCACGATTC GATGATGTTC
GAGAAATGCA CCAATGCTTT GCCGGCCATC AAGGGGCTGC GAGGCAAGCC GCGTTGCAGG
CCATCGAGGC TGCATGCCGA CAAGGGCTAC GACTACGCGC GCTGCCGTGC CTATCTGAAG
AAGCGAGGCA TCGCCAGCCG GATTGCCAGA AGAGGCGTCG AGAGCCGCGA GCGGCTGGGT
CGGCATCGCT GGGTGGTGGA GAGAACCCAT GGATGGTTTG CAGGCTTTGG CAAGCTGCGC
ATTCGCTTCG AGCGGCGGCT GGACATCCAC GAAGCGCTGT TGAAACTGGC TGCAGCGATC
ATCTGTGCGC GCTTGTGGAC CGGTGGCGTT AGCCGCTCTT AG
 
Protein sequence
MELGEHRWLV GAKPPGGQET GPNPTDRGKL GSKRHIVVDA RGIPLVVLVS GANRHDSMMF 
EKCTNALPAI KGLRGKPRCR PSRLHADKGY DYARCRAYLK KRGIASRIAR RGVESRERLG
RHRWVVERTH GWFAGFGKLR IRFERRLDIH EALLKLAAAI ICARLWTGGV SRS