Gene Aave_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0088 
Symbol 
ID4669407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp93500 
End bp94108 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID639821301 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_968476 
Protein GI120608798 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTC ACGCCCCCCA GGCCGCATTC CTTGCCGGCC TGCTGGCCTA CCAGGCCATC 
CGCACCATCT ACCAGCGCCG CGCGCGCGCT GCGGGCCCGT CCAGGGCGAG CTATTCCAGC
CGCCAGGACA AGGCGCTGAT CGCGCTGGTG GCGATCGGGC AGATGGTGCT GCCGCTGGCG
TACATCTTCA CGCCCTGGCT CGATGGAGCC TCGCACGATG TGGCTCCCGA CGTGCTGCCG
TATGCCGGTG CGCTGGTCTG GGCCGCGGGC CTGTGGGTGT TCTGGCGCGC CCACGCGGAG
CTGGGTACGT GGTGGTCGAT CACGCTGGAG ATCCGCCACG ACCACCAGTT GGTCCAGCGC
GGCGTGTACC GCGCGGTGCG GCACCCCATG TATGCCGCGT TCCTGCTGTT CGGCGTGGCG
CAGGCCCTGC TGCTGCCCAA TGCCATCGCG GGGCCCGCGG CACTGGTCGC GGTGGCCATC
CTCTGCATCG TGCGCATCCC CCGCGAGGAG GCGATGATGT GCGAAGTGTT CGGGCAGGCG
TACCGCGACT ACATGCGGAC CACGGGCGCG GTCATTCCGC GGCTGGTGCC GCGGCGGCGC
ATCGCCTGA
 
Protein sequence
MHLHAPQAAF LAGLLAYQAI RTIYQRRARA AGPSRASYSS RQDKALIALV AIGQMVLPLA 
YIFTPWLDGA SHDVAPDVLP YAGALVWAAG LWVFWRAHAE LGTWWSITLE IRHDHQLVQR
GVYRAVRHPM YAAFLLFGVA QALLLPNAIA GPAALVAVAI LCIVRIPREE AMMCEVFGQA
YRDYMRTTGA VIPRLVPRRR IA