Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_0082 |
Symbol | |
ID | 4669579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 87190 |
End bp | 88104 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639821295 |
Product | AraC family transcriptional regulator |
Protein accession | YP_968470 |
Protein GI | 120608792 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGCA CCGCACTTTC CGCATCCGGG GACGGACCAC GGCCGGCCCG CGCCCCGCGC ACGCAGCGCG CGCTGTCCTA TGTGGACTCG CTCACGCCGC ATCTGTTCGT GCCGAGCGCC GCGCGGCCGG TGCGCGCCAA GGCACGCCAT CTGTCGGCCG ACACGCAGGT GCTGCCGCAC AGCCACCCCT GGGCGCAGGT GGCGGTGTCC ACGACGGGCG CGATCCGGCT CACCGTGGCG CAGGGCACCT ACATCGTGCC GCCCTCCCGC GCGCTGTGGA TTCCGCCCGG GGTGGAACAC ACGGTGACCA TGGTGGAGAG CGCCGATCTG CGCACCCTGT ACCTGTACCA GCCGCGCGGG CACTGCGGCC CGGGTGTGCC GCGCGCCGAG CAGGCGCCCT GGCGGCAGTG CCGCGTGCTG GAGGTGTCGG ACCTGCTGCG CGCGCTGGTG CGCGAGATGC CGTGCGAGCC CGACGATGCG CCCCCGCCGT CCGGCGAGGC ACTGCACAGG GAACGGCTGC TGAGCGCGCT GCTGCTGGAT GAATTGCGCC GCGCTCCCGT GGTACGCCTG GGCGTGGATC TGCCTCGCGA CAAGCGGCTG CGCCATCTGT GCGAGGCCAT GCTGGCCGAC CCCACGCGGC ACGAGGCACT GGCCGACTGG GCGCGCGATA CCGGGGCGAG CCCGCGCACG TTGGCCAGGC TCTTCCGCAC CGAACTGCAC ACGACGTTCA CGCAGTGGCG CCAGCAGGTG ATCCTGGCGC AGGCAGTGGC GCTGGCGGCC ACGCGCCGGC CCATGGGACA GATCGCGGCG GAGCTGGGCT ACAGCCCGAG CGCCTTCAGC GCGATGGTGC GGCGCACGGT AGGCATGGCG CCGGGACGTT TCCTGGGCAC GCAGGCCGGG TCGCGCAGCG GCTGA
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Protein sequence | MPSTALSASG DGPRPARAPR TQRALSYVDS LTPHLFVPSA ARPVRAKARH LSADTQVLPH SHPWAQVAVS TTGAIRLTVA QGTYIVPPSR ALWIPPGVEH TVTMVESADL RTLYLYQPRG HCGPGVPRAE QAPWRQCRVL EVSDLLRALV REMPCEPDDA PPPSGEALHR ERLLSALLLD ELRRAPVVRL GVDLPRDKRL RHLCEAMLAD PTRHEALADW ARDTGASPRT LARLFRTELH TTFTQWRQQV ILAQAVALAA TRRPMGQIAA ELGYSPSAFS AMVRRTVGMA PGRFLGTQAG SRSG
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