Gene Aave_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0057 
Symbol 
ID4668862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp62483 
End bp63469 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content76% 
IMG OID639821271 
Productintegral membrane protein 
Protein accessionYP_968446 
Protein GI120608768 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCC GCACCGCCGT CGCCGCCGCC CTGGCCTGCA CGGCCGCCTA CGTGGCGGCC 
CTGGTCTGGG CCGACGCCCG CAACCAGGTC TTCGCGCAGC TGCCGCGCGT GGCGGCGTGG
ATGCCCGGCA TGGCGGCCGT GGCGTTCGCC TCCTATGCGC TGCGCTATGC GCGCTGGCGC
TGGCTGCTGC GCCGGGCGGG GCACCGCGTA CCGGCCGTGG CGGGGTTCGC GGGCTACCTG
GCAGGCTTCG CCTTCACCGC CACGCCGGGC AAGGTGGGCG AGCTGGTGCG CGCCCGCTAC
TTCACGCGCT GGGGCGTGCC GGCGGCCCGC ACGCTCTCGG CCTTCGTCTA TGAACGCGCG
TTCGATCTGC TCACGGTGGC GCTGCTGGCC GCGCTGGCCG TGCCCTCCGG CCGCCTGTTC
GGCATCGTGC TGGCTTTCGT TGCGGGGCTG ATCGGCGCGG TCGCCGCGGT GGCGGCCCGG
CCCCGCTGGC TGCGGCGCCT GGCCGCGCGC ATGCGGGCCA CGGGATGGCG CCGCACGGCG
CGCGCCGGCC GCATGCTCGC GCTCGGCCTG GCAGGCTGCC GCCTCTGGCT GACACCGTGC
GACATGGCCG TCTCCTTCGG CCTGGGCCTG GCCGCCTGGA TGATCATCGC CGCATCGTTC
GCCTGGCTGC TGCAAGGGCT GGACATCGCG CTGCCGCTGC GCGCGGCGCT GTCCACCTAC
CCGACGGCCA TGCTGGCCGG CGCGGCATCG ATGCTGCCGG GCGGCATCGG CACCACCGAG
GCCACCATCG TGGCCTTGCT GGCGCTGCAC GCCGTGCCGC TGGGCACCGC GGCGCTCGCG
GCCGTGGGCA TCCGCTTCGC CACGCTGTGG GTGGCCGTGG CCTGCGGCTT CGCCGCCATC
GGCTGGCTGG AACGCCGCCC CTCGGCCGGC GTCGCCACCG TCCTGCCGGC CGGGGAGCGG
GCCACCCCTG CGCGCCGGAA AACGTAG
 
Protein sequence
MHPRTAVAAA LACTAAYVAA LVWADARNQV FAQLPRVAAW MPGMAAVAFA SYALRYARWR 
WLLRRAGHRV PAVAGFAGYL AGFAFTATPG KVGELVRARY FTRWGVPAAR TLSAFVYERA
FDLLTVALLA ALAVPSGRLF GIVLAFVAGL IGAVAAVAAR PRWLRRLAAR MRATGWRRTA
RAGRMLALGL AGCRLWLTPC DMAVSFGLGL AAWMIIAASF AWLLQGLDIA LPLRAALSTY
PTAMLAGAAS MLPGGIGTTE ATIVALLALH AVPLGTAALA AVGIRFATLW VAVACGFAAI
GWLERRPSAG VATVLPAGER ATPARRKT