| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0038 |
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| Symbol | |
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| ID | 4666265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 41967 |
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| End bp | 45053 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639821254 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_968429 |
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| Protein GI | 120608751 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC TCATCCACTA CGCGCTGCAC CAGCCCCTGT TCATCATCCT GGGCGTGCTG
CTGTTCGCGC TCGCGGGCGT GATCGCCTTC AAGAACCTGT CGGTGGAGGC CTTCCCGGAC
GTCACCGACA CCCAGGTCAC CGTGATCGCG CTCTTTCCCG GCCGCGCGCC GGAAGAAGTG
GAAAAGCAGG TCACGCTGCC CATCGAGACC GCCCTGGCCG GCCTGCCCAA CTCCATCCGC
GTGTTCTCCC ACACGCAGTT CGGGCTGTCG TTCACCGTGG TCACGTACGA CGACGCGGCC
AATGTGAACA CCGTGCGCCA GCAGGTGGCC GAGCGGCTCT CGACCGTCGA TCTGCCGCAG
GGCGTGCAGG CCGAGATCGC GCCCAACGCC ACGCCGGTGG GCGAGATCAT GCGCTACCGC
CTAAAGGGCG ACGGCCTCAC CACCACCGAC ATCCGCACCA TCGAGGACTG GACGGTGGAG
CGCGCGCTGC GCCAGGTGCC CGGCGTGGCC GACGTGGTCG CCATGGGCGG CGCCATCAAG
CAGTACGAAG TGCAGCCCGA CATGGACAAG CTGCGCGCGT ACAAGGTGAG CTTCCAGAAC
CTGCTGGACG TGCTGGGCCG CGGCAACGCC AACGCGGGCG GCAGCTACGT GGCGCAGGGC
GCGCAGCAGT ACACCATCCG CGGCCTGGGC CTGCTGCGCT CGGCCGAGGA CATCGGCCGC
ATCGTCGTGG CCTCGCGCGG CGGCACGCCC GTGCTGATCC GCGACATCGC CCAGGTGCGC
ATCGGCGCCG TGCCGCAGCT CGGCGTGGTG GGCCAGGACC AGGACGACGA CATCGTCACC
GGCATCGTGG TGATGCGCAA AGGCGAGAAC CCGAGCGTGG TGCTCAAGGG CGTGAAGGAC
AAGATCGCGC AGCTGAACGA GCGCGGCCTG CCGCCGGGCG TGCAGATCGT GCCCTTCTAC
GACCGCACCT GGCTGATGGA CAAGACCCTC ACCACCGTCT TCCACAACCT GGTGGAAGGT
GCGCTGCTGG TCTCGCTGGT GCTCTACATC TTCCTGTCGA ACCTGCGCGC CAGCCTGGCC
GTGGTGGTCA TCATCCCGCT CGCCCTGCTC TCCACCTTCA TGGGCCTGAA GGTCATGGGC
GTGCCGGCCA ACCTGCTGAG CCTGGGCGCG ATGGACTTCG GCATCATCGT GGACGGCGCG
GTGATCGTGA TCGAGAACAT CATGCACCGC CTGGCCGAGC GCGGCGAGGA CATGAATGAC
CGCGACCGGC GCGACACCAT CATCGAGGCC GCGGGCGAGG TCGGCCGGCC CACGCTGTTC
TCGATGCTCA TCATCATCGC GGCGCACATC CCCATCTTCG CGCTGCAGCG CCACGAGGGC
CGCATCTTCC AGCCCATGGC GCTGTCGGTC ACCACGGCCC TCATCGGCTC GCTGATCTTC
TCGCTCACGC TGGTGCCGCT GCTGGCCTAC TGGCTGCTGC GCCGCAAGCT GCCGCACGGC
GACAACCGCG TGGTCACGCG CGCCAAGAGC CTGTACGCGC CGGTACTGGA CTGGGCGCTG
GAGCGCCGCC GCACGGTGGT CATCATCGCG CTGGCCGTGT TCGGCGTGGC CATGGTGGCG
GCCTCGCGCC TGGGCTCGGA ATTCCTGCCG GAACTGGATG AGGGCACGAC CTGGGTGAAC
TTCAGCCTCT CGCCCAACGT CTCCACCGCC GAGGCCTCGC GCATCCTGCG CATGGCGCGC
AAGGCATTGC TGTCGGTACC CGAGGTGCGC ACCACCGTCT CCAAGGCCGG CCAGCCCGAG
GACGGCACCG ACCCCAAGAC CATCTCCATG GCCGAGATCT TCGTGGACCT CAAACCCGAG
GACCAGTGGC GCGCCGGCAT GACGCGCGCG AAGATCACCG AGGAAATGAA CCGGGCCCTC
TCGGCCATCC CTGGCATCGA CCCGGCGTTC TCGCAGCCCA TCCGCGACAA CGTGCTCGAA
TCGATCTCGC AGATCAAGGG CCAGATCGTG ATCAAGCTGG CCGGCGACGA CCTGGCCGAG
ATGAAGCGCA TCACGGAAGA GATCGCCCGC GAGGTCAAGC AGGTGCGCGG CGTGGCCCGC
GCCGAGATCG ACCGCGAAGG CCAGGTGCCG CAGCTGCTGA TCGACATCGA CCGCGACCGC
GCCGCGCGCT ACGGCCTGAA CGTGAGCGAC ATCCAGGACG TGATCGAGGC GGCGCTGGCC
GGCAAGGCCG CCACCAACCT GTGGGAAGGC GAGCGCAAGT TCGCCGTCGC CGTGCGCCTG
CCGTCCGACG AGCGCACCAT CGCCAACCTG CCGCGCACGC CTATCGCCAC GCCGGACGGC
GGCTATGTGC AGCTGGGCGA CGTCGCGAAG ATCCGCGAAA GCGCGGGCGC CATGAACATC
GCCCGCGAGG CCGGCCGCCG CACCACGGCC ATCGGCATCT TCATCGCCGG GCGCGACATG
GGCTCCGTCG TGGCCGACAT GAAGGCCCGC GTCGAGAAGA ACGTGAAGAT CCCGGACAAC
TACCAGGTCA ACTGGTCGGG CGAGTTCGAG AACCAGGAAC GCGCCATGAA GCGCCTCTCG
GTGGTCGTGC CCATCTCGCT GCTGCTGATC TTCGTGCTGC TGTTCGATGC CTTCAAGTCG
GTCAAGATGG CCTCGCTCAT CCTGCTGAAC GTGCCCCTGG CGCTCATCGG CGGCTTCGTG
GCGCTCTGGG CCTTCGGCAT CCCGCTGTCG GTGTCCGCCG CCATCGGCTT CATCGCGCTC
TCGGGGCAGG CCGTGCTCAA CGGCGTGGTC ATGCTCTCGG TGTTCCAGCA ACTGCAGGCC
GGCGGCGCCA GCGTGGTCGA GGCCGTGCGC CAGGGCTCCA TGCAGCGCCT GCGCACCGTG
CTGATGACGG CGATGCTCGC CATGCTGGGC CTCTTGCCCA TGGCCCTCTC GCACGAGATC
GGCTCCGAGA CGCAGCGGCC TCTCGCCATC GTGGTGATCG GCGGCCTGGT GACGGCCACG
ATGCTCACGC TGGTGGTGCT GCCGGCGCTG TACGTGGCGT GGTTCGGGCC GAAGAAGGGG
CAGGAGGAGC CTGGCGTGCT CGCGTGA
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| Protein sequence | MKRLIHYALH QPLFIILGVL LFALAGVIAF KNLSVEAFPD VTDTQVTVIA LFPGRAPEEV
EKQVTLPIET ALAGLPNSIR VFSHTQFGLS FTVVTYDDAA NVNTVRQQVA ERLSTVDLPQ
GVQAEIAPNA TPVGEIMRYR LKGDGLTTTD IRTIEDWTVE RALRQVPGVA DVVAMGGAIK
QYEVQPDMDK LRAYKVSFQN LLDVLGRGNA NAGGSYVAQG AQQYTIRGLG LLRSAEDIGR
IVVASRGGTP VLIRDIAQVR IGAVPQLGVV GQDQDDDIVT GIVVMRKGEN PSVVLKGVKD
KIAQLNERGL PPGVQIVPFY DRTWLMDKTL TTVFHNLVEG ALLVSLVLYI FLSNLRASLA
VVVIIPLALL STFMGLKVMG VPANLLSLGA MDFGIIVDGA VIVIENIMHR LAERGEDMND
RDRRDTIIEA AGEVGRPTLF SMLIIIAAHI PIFALQRHEG RIFQPMALSV TTALIGSLIF
SLTLVPLLAY WLLRRKLPHG DNRVVTRAKS LYAPVLDWAL ERRRTVVIIA LAVFGVAMVA
ASRLGSEFLP ELDEGTTWVN FSLSPNVSTA EASRILRMAR KALLSVPEVR TTVSKAGQPE
DGTDPKTISM AEIFVDLKPE DQWRAGMTRA KITEEMNRAL SAIPGIDPAF SQPIRDNVLE
SISQIKGQIV IKLAGDDLAE MKRITEEIAR EVKQVRGVAR AEIDREGQVP QLLIDIDRDR
AARYGLNVSD IQDVIEAALA GKAATNLWEG ERKFAVAVRL PSDERTIANL PRTPIATPDG
GYVQLGDVAK IRESAGAMNI AREAGRRTTA IGIFIAGRDM GSVVADMKAR VEKNVKIPDN
YQVNWSGEFE NQERAMKRLS VVVPISLLLI FVLLFDAFKS VKMASLILLN VPLALIGGFV
ALWAFGIPLS VSAAIGFIAL SGQAVLNGVV MLSVFQQLQA GGASVVEAVR QGSMQRLRTV
LMTAMLAMLG LLPMALSHEI GSETQRPLAI VVIGGLVTAT MLTLVVLPAL YVAWFGPKKG
QEEPGVLA
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