| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_0025 |
|---|
| Symbol | rdgC |
|---|
| ID | 4666249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 30029 |
|---|
| End bp | 31024 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639821241 |
|---|
| Product | recombination associated protein |
|---|
| Protein accession | YP_968416 |
|---|
| Protein GI | 120608738 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2974] DNA recombination-dependent growth factor C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAAGA ACATGATCAT CTACCGCATC GCCGAGTGGC ATGCGGAACT GCCCCAGCTC
GAGGAAGCCC TGGCCCGCAC CCCGTTCGTG GAATGCGGCG CCACCCAGGA AAAATCCGTG
GGCTGGGTAC CGCCCCGGGG CGAGGCCCAC GGCGCGCTCG CCGAATCCGT GGGCGGCCAG
TGGATCCTGC GTTTCATGAC CGAGTCCAAG ATGCTCCCGG GATCGGTCCT GGCGCGCAAG
GTCAAGGACA AGGCCGCTCG CATCGAGAAG GAAACCGGCC GCAAGCCGGG CAAGAAGGAA
ACCCGCGAAC TCAAGGAAGA GGCCAAGCTC GACCTGCTGC CGATGGCGTT CACCAAGCAG
GGATCGATGT GGGTCTGGAT CGACACCGAG GCGCGCCTGC TGGTGCTCGA CACCGGCAGC
CAGGGCCGGG CCGACGAGGT CGTCTCGCTG CTGGTGGAAG CGCTGCCGGG CCTGTCGGTC
TCCCTGCTCG ATACGCAGAC TGCGCCGCAG GCGGCCATGG CCCACTGGCT CAAGGAGCAG
GAACCTCCGG TGGGCTTCAG CGTGGACCGC GAGTGCGAAC TCAAAAGCGC CGATGAATCC
AAGGCCGTGG TCCGCTATGC GCGCCATCCG CTGGACATCG ACGAGATCCG TGAGCACATC
GCCGCCGGCA AGCTGCCCAC CAAGCTCGCG ATGAGCTGGG ACGACCGCGT CGCCTTCGTG
CTGACCGAGG GCTTGCAGAT CAAGAAGGTG TCGTTCCTCG ACACGGTGTT CGAGGGCCGG
GGACAGGACG ATTCGGGCTT CGACACCGAC GTGGCGATCG CCACGGGCGA ACTCTCCAAG
CTGATCCCTG ACCTGATCGA GGCGCTGGGC GGCGAGGGCC GCACGGGCCT GGACGGCCCG
GCGCCGGCAC CCGGCGAGCG CCAGGCCGAG GCGGGTGGTG CCGCCACCGC ACAGGCCGCT
GCCACGGCGG ACGCGGACGA CGACGCACCG TTCTGA
|
|---|
| Protein sequence | MFKNMIIYRI AEWHAELPQL EEALARTPFV ECGATQEKSV GWVPPRGEAH GALAESVGGQ
WILRFMTESK MLPGSVLARK VKDKAARIEK ETGRKPGKKE TRELKEEAKL DLLPMAFTKQ
GSMWVWIDTE ARLLVLDTGS QGRADEVVSL LVEALPGLSV SLLDTQTAPQ AAMAHWLKEQ
EPPVGFSVDR ECELKSADES KAVVRYARHP LDIDEIREHI AAGKLPTKLA MSWDDRVAFV
LTEGLQIKKV SFLDTVFEGR GQDDSGFDTD VAIATGELSK LIPDLIEALG GEGRTGLDGP
APAPGERQAE AGGAATAQAA ATADADDDAP F
|
|---|
| |