Gene Aave_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_0005 
Symbol 
ID4666222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp7309 
End bp7668 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content63% 
IMG OID639821222 
Productputative type I restriction enzyme, R subunit 
Protein accessionYP_968397 
Protein GI120608719 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA AAAACTGGAG CGAAACCGAC GTTTGCGAGA AGCGCATCAG TCCGGCCATT 
GCCTGCGCTG GCTGGGATCT GATCACCCAG GTGCTGCGCG AGTACACGTT GCGTGCAGGA
CGGGTGGTGG TGCGTGGAAA TACTGCATTT CGCGACAAGA ACAGTATCTT GCGTGCGGAC
TACGTCCTGT TCCACAAGCC CAAGGTTCCG CTGGCAGTGG TCGGCATCGT CACCCGCGTC
ACCGCCCTGC GCCGCCTGTG CGCCGACCTG CGCCAGCGCC TGGCCAAACG CCAGTCCGTG
CAGGCCCGTC TGGCCGAGGC GCTGGTGGAG ACCGCTAGCT TTTCTTCGGA GCCTTGCTGA
 
Protein sequence
MDKKNWSETD VCEKRISPAI ACAGWDLITQ VLREYTLRAG RVVVRGNTAF RDKNSILRAD 
YVLFHKPKVP LAVVGIVTRV TALRRLCADL RQRLAKRQSV QARLAEALVE TASFSSEPC