Gene Dvul_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2889 
Symbol 
ID4664886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3376305 
End bp3377084 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID639821150 
Productglucose-1-phosphate cytidylyltransferase 
Protein accessionYP_968327 
Protein GI120603927 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR02623] glucose-1-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA TCATCATGTG CGGCGGCAAG GGAACCCGCC TCCGCGAAGA GACCGAGTTC 
AAACCGAAGC CCATGGTCGA GATTGGCGGT CGCCCCGTCC TGTGGCACAT CATGAATATC
TACGCCCGCG CCGGGTACAA GGACTTCGTC CTGCCCCTCG GCTACAAGGG CGAGGTCATC
AAGCAATATT TCTACGACTA CCGGATGCGT AACAGCGACT TCACCGTCGA CCTCGCCACC
GGTGACGTGC GCACCCACGA GACGGGCTGC TGCACCGACT GGCGCGTGAC CCTGTCCGAC
ACCGGGCAGG AGACGCTGAA GGGCGCACGC ATCAAGCGCA TCGCCAAGCA CATCGACACC
GACCGCTTCA TGGTCACCTA CGGCGACGGC GTGTCGGACA TCGACATCGC CAAGCTCGTG
GAGTTCCACA AGAAGTCCGG CAAGATTGGC ACGTTCACGG GTGTGCGCAT GCCCTCGCGC
TTCGGCGCGG TGCAGACCGA CGAGAACGGC AACATCCTGT CGTGGCAGGA GAAGCCGGTA
CTCAACGAGT ACATCAACTG CGGCTTCTTC GTGTTCAAGC GCGAGTTTCT CGACTACCTC
GATGAAGAGG AGTCGTGTGA CCTCGAGAAG CAGCCGCTGG AACGTCTGGC CGCCGAAGGG
CAGCTTTCGA TGTACCCGCA CGAGGGCTTC TGGCAGTGCA TGGACACCCT GCGCGACTAC
CAGAAGCTGA ACGCCATGTG GGACAAGGGC GACGCGCCCT GGGCCCGCGG GTGGAAATAG
 
Protein sequence
MKVIIMCGGK GTRLREETEF KPKPMVEIGG RPVLWHIMNI YARAGYKDFV LPLGYKGEVI 
KQYFYDYRMR NSDFTVDLAT GDVRTHETGC CTDWRVTLSD TGQETLKGAR IKRIAKHIDT
DRFMVTYGDG VSDIDIAKLV EFHKKSGKIG TFTGVRMPSR FGAVQTDENG NILSWQEKPV
LNEYINCGFF VFKREFLDYL DEEESCDLEK QPLERLAAEG QLSMYPHEGF WQCMDTLRDY
QKLNAMWDKG DAPWARGWK