Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2865 |
Symbol | |
ID | 4664709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 3337814 |
End bp | 3338701 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639821121 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_968303 |
Protein GI | 120603903 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGC GTAACGCCTT CCGCAACGCG AGCATCGCAG TCGTGGCGCT GTGGCTGGGG CTCTTCGCCC TGCTGCCCAA TGCGGGGCTG CTGCTCGTCA CCGTGCTGCA ACGGGGCGAA CAGGACTTCG TGGAACCCGT GTTCACGCTG GCCAACTACG CCCGCCTCTT CGACCCCACC TTCCTGCGCA TCCTGTGGGA CAGCATCGCG CTGGCGGCCA CAAGCACCTT CGTGTGCCTG CTGGTGGGCT ACCCCTTCGC CTACCGCATC GCCATGGCGC GGCGCAGCGT CCGCCCGTGG TTCCTGCTGC TGGTCATCAT CCCCTTCTGG ACCAACTCGC TCATCCGCAC TTACGCGCTC ATCATCCTGC TCAAGTCGCA GGGGCTGGTC AGCGACGTGC TGCTCTTCCT CGGCTTCATC GACGCCCCCA TATCGCTCAT GTACAGCGAC CTCGCTGTGT TCGTGGGCCT CACCTACACG TTGCTGCCGT TCATGATCCT GCCGCTGTAC GTCTCCATCG ACAAACTCGA CCGGAAACTC CTCGATGCGG CCAAGGACCT TGGCGCAGGC AGCCTGCGCG CCTTCTGGCA CGTGACGCTG CCGCTCACCA TGCCCGGCAT CGTGGCGGGT TCCATGCTTG TCTTCCTGCC TTCGCTGGCC TGCTTCTACA TCCCGGAGAT TCTGGGCGGG GCCAAGGCCA TGCTCATCGG CAACTTCATC AAGAACCAGT TCCTCGTGGC GCGTGACTGG CCGCTGGGCG CAGCCGCGAG CACCATCCTC ACGCTGCTTC TCGTGCTGCT CATCGTGGCG TGGTGGCTGG CAAGCCGCCG GGTGGCCGCG CGCGAGAAGC ACGAACAGGA TGCCGCGCTG TTCACGGAGG CCGGGTAG
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Protein sequence | MAKRNAFRNA SIAVVALWLG LFALLPNAGL LLVTVLQRGE QDFVEPVFTL ANYARLFDPT FLRILWDSIA LAATSTFVCL LVGYPFAYRI AMARRSVRPW FLLLVIIPFW TNSLIRTYAL IILLKSQGLV SDVLLFLGFI DAPISLMYSD LAVFVGLTYT LLPFMILPLY VSIDKLDRKL LDAAKDLGAG SLRAFWHVTL PLTMPGIVAG SMLVFLPSLA CFYIPEILGG AKAMLIGNFI KNQFLVARDW PLGAAASTIL TLLLVLLIVA WWLASRRVAA REKHEQDAAL FTEAG
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