| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2799 |
|---|
| Symbol | |
|---|
| ID | 4663493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 3255105 |
|---|
| End bp | 3256667 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639821054 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_968237 |
|---|
| Protein GI | 120603837 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.741108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTC TCATCGCGTT GTTGTCCCTG GCTCTTGCGG CCATGCTCGC CCTCGGCGGC
ATCGCCAACG CTGCCGAAGG CAAGACCTTC CGCATCGCCA TGGCGTCCGA CCCCGAGTCC
CTCGACCCCC ACATGCAGCT TTCCGGCCCC ATCCTGGCAT ACTCGCACTG GGTCTTCGAC
CCGCTGGTAC GCTGGACCCC GGACATGAAG TTCGAAGCCC GCCTTGCCGA GAAGTGGGAA
CAGATCAACC CCACCACCAT GCGTTTCCAC CTGCGCAAGG GCGTGAAGTT CCATAGCGGC
AACCCCTTCA CCGCGAAGGA CGTGGCATGG ACGCTCGACC GCCTGAAGAA GTCCCCCGAC
TTCAAGGGCC TGTTCATCAA GTTCGCCGAG CCCAAGGTCA TCGACGACAA CACCATCGAC
ATCATCACCA CCGAGCCCTA CGGCCTCGTG ATGAACCTCG CCACCTACAT CTTCCCGATG
GACAGCAAGT TCTACACTGG CACCGACGCC AAGGGTCAGC CCAAGGACGC CATCGTGAAG
AGCGGCTACT CGTTCGCCAA CGACAACGCC TCCGGCACCG GTCCCTACAG CGTGGCCGAG
CGTGAACAGG GCGTGAAGCT CATCCTCAAG GCCAACAAGG GCTACTGGGG CAAGCGCGGC
AACGTCGACA CCATCGAACT CACCCCCATC AAGAACGAAG CCACCCGCGT GGCCGCCATC
CTGAAGGGCG ACGTCGACTT CATCTCGCCC GTGCCCGTGC AGGACTACGA CCAGCTTTCC
AAGAATGCCG ATGTGGAACT GATCACCATG CCCAGCGCCC GCATCATCAC CATTCAGCTC
AACCAGAAGA AGTTCCCCCA GTTCGCGGAC AAGCGCGTGC GTGAAGCCAT CATCGCCGCC
ACCGATACCG CCGGTATCGT GGCCAAGGTC ATGAAGGGCT ACACCACCAC CACGCAGCAG
CAGGCCCCCA AGGGCTTCGC TGGCTACATC GCCGACCTCA AGCCCCGCTA CAATCTCGAC
AACGCCAAGA AGCTCATGAA GGACGCCGGC TTCGAGAAGG GCTTCGAAGT GTCGATGATC
GCCCCCAACA ACCGCTACGT GAACGACGAG AAGATCGCGC AGGCCTTCGT TTCGATGATG
GCTCGCATCA ACATCAAGGT GAACCTCAAG ACCATGCCCA AGGCGCAGTA CTGGGACCAG
TTCGACGCCC AGGTTGCCGA CATCCAGATG ATCGGCTGGC ATCCTGACAC CGAGGACACC
GCCAACTACT CCGAGTACCT GCTCATGACC CCCAACAAGG ACACGGGCAT GGGCCAGTAC
AACAGCGGCA ACTACGCCAA CCCCAAGTTC GACGCCCTCA TCGACGCTGC CAACCGCGAG
ACCGACCCGG CCAAGCGTGA CGCGCTCCTG AAGGAGTCGG AGCAGATGGC TTACAACGAC
GCCGCCTTCG TGCCCCTGCA CTGGGAACCG CTGTCGTGGG CAGCTCGCAA GACCGTCAAG
AACGCCAAGC AGGTCGTCAA CGCGCAGGAC TTCCCCTACT TCGGCGATCT GATGATGCAG
TAA
|
|---|
| Protein sequence | MKRLIALLSL ALAAMLALGG IANAAEGKTF RIAMASDPES LDPHMQLSGP ILAYSHWVFD
PLVRWTPDMK FEARLAEKWE QINPTTMRFH LRKGVKFHSG NPFTAKDVAW TLDRLKKSPD
FKGLFIKFAE PKVIDDNTID IITTEPYGLV MNLATYIFPM DSKFYTGTDA KGQPKDAIVK
SGYSFANDNA SGTGPYSVAE REQGVKLILK ANKGYWGKRG NVDTIELTPI KNEATRVAAI
LKGDVDFISP VPVQDYDQLS KNADVELITM PSARIITIQL NQKKFPQFAD KRVREAIIAA
TDTAGIVAKV MKGYTTTTQQ QAPKGFAGYI ADLKPRYNLD NAKKLMKDAG FEKGFEVSMI
APNNRYVNDE KIAQAFVSMM ARINIKVNLK TMPKAQYWDQ FDAQVADIQM IGWHPDTEDT
ANYSEYLLMT PNKDTGMGQY NSGNYANPKF DALIDAANRE TDPAKRDALL KESEQMAYND
AAFVPLHWEP LSWAARKTVK NAKQVVNAQD FPYFGDLMMQ
|
|---|
| |