Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2798 |
Symbol | |
ID | 4663649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 3252602 |
End bp | 3254671 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639821053 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_968236 |
Protein GI | 120603836 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2703] Hemerythrin |
TIGRFAM ID | [TIGR02481] hemerythrin-like metal-binding domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.803852 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGGAT CCAGAGTCAT CACAGCTGCC TTTGTCGTTC TGGTTCTGAC CCTCATTGGC ACGGTGCTGT TGCATGTGCA GGTCGAACGC TACCACGCGC AACGCGAAAC CGCGGCCGAA GGGTTGATGC AGGTCAGTGC CGAAGGCAGC CGTCTCGTCC AGTCCTATGG TTCTGGCAAG GATGCGGGTG AAGGTGCGGG CGTGGCGACG CTTGAGCGGA AGGTCTCCTC GCTGCGTGCT TCGTTGCGTG GGCTTCATGA AGGGCGCGAG AACCCCGATT TGGCCGCTTC TCTCGGTTCG TTGGCGGAAC AGGTGCAGGG CCTCAAGGTC GCCATGGAAT CCGCCGCACG ACCGGAAGAG ATGCTTCGGC GCACGGCCGA CCTCTCACAG GCAGCGGCAC GCGCCGAGAA TCTCGTCGAC AAGGCTATAG AAGGCCGCGT CGGATGGATG TCGCGGCTTG AAGGGGCCAT GCTCTTCGTG ACGTTCTTGG GCGTGGTACT GGCGGCGTTT CTCCTGCAAT GGCGGGTCTT CAGGCCATTG TCCATGGTCG AGGCCTACGC GCGCGAACCC AACGGTGAGC GGCTGGCGCT CGGACGTGGC GTGGCCCGTG GGGTTGCCGC CATGGGGGCG GCTGTGGATG ACATGCACCG CGACCGGGAC AGGGCCCTTG AGAACGCCGA GCGTGAGCTT GAAGCTTTGA GGGCAGAGAA ACGGGCGCTG GAGGAGCCCC TGCGCCGTGC GGAGGAACAG GAACGCATGG TGGCGGCCCT CATGAAGGGT ATGAAGGATG CGGCGTCACG GGCTGGGGGT GTGTCTGAAG GGGTCTTCGG GGCCGTCGAG GAGATGAACG GCTGGATAGA GAGAGTGAAC CGGGGCATCG AGGTGCACCA TTCACGTATG GGGCAGGTCT CGGAAGCCAT GGACGAGATG AACGTCGCCT CCGTCGAGGT GGCCCGCAAC TCCGGCGGTG CGGCCCGGTC GGCTGAAAGT GCCCGCACTC TTGCCGGAAC AGGTGCCGAC CGGGTGCGCG AGGCACTGGA TGCCATCAGC GCCATGCAGC GCAGGGTACT GGAGTTGCGC GATACCATGG GTGAACTCGG GCATCGTGCC GAGGCCATCG GACGCATCAT GGACGTCATC AACGACATCG CCGACCAGAC GAACCTGCTT GCCCTCAACG CCGCCATCGA GGCCGCTCGT GCGGGTGAGG CGGGGCGCGG CTTTGCCGTG GTAGCCGACG AAGTGCGCAA ACTCGCCGAG AAGACCATGG GTGCCACCAA GGAGGTGGGC GACGCCGTGC AGGCCATGCA GAGTCAGGCG CGCACGAGCA TCGCGGGCGT CGAGGAGGTG GGACGCCAGA TGGAAGGTAC GGCGGCCGCT GCGGAGGGGG CGGGCGGCGC CATGGGCGAG ATAGTCGGTG TGGTGGAACA GACGTCGATG CAGGTGGGCG CCATCGCCAC GGCGGCGGAA CAGCAGGCGG CGGGGCTTGA GAGCATCAGC GAGGCCATCG GCGAGATATC GCGGGTGGCG GGCGAGACCG CAGAGAGTAT GCGCCAGTGT ACACGCGCGT TGCAGGGCAT CGGGTCGCGC ATGGAGGAAC TCGATACGGT GGTGCAGTCC ATGGCCGAAG GCCGTGTCGG TCTCGCCGGG GGCGGCGACA AGCTGTTCGA GTGGGATGAT GCGCTGAACA TAGGGGTGGC AGACGTGGAC CCGCAGCACA AGGTGCTGGT GGACCTCATC AACGAGGTCT ATACCGCAAT GAAGGCGGGG GCGGACAGGT CAGTGCTGCA GGACATTGTC AGGAGGCTTC GCGAATACAC CGTAAAGCAC TTCACCTACG AAGAGGGTGT CCTGCACACG TCCATGCGGT ACCCGGACAT GCAGGCGCAC CTCAAGCAGC ACAGGGCGTT CGTCGAACGC ATCGCGCAAT TCGAAGAGGC GCTGGGCAGC GGCCGTGTGA CGCTGGACAT GGAGATGATG CGCTTCCTGA AGAACTGGCT GAAGCAACAT ATCATGGGAA CGGACAAGAA ATATGTGCCA TACTTCAACG GAGATGGCAC ACCGAAATAG
|
Protein sequence | MKGSRVITAA FVVLVLTLIG TVLLHVQVER YHAQRETAAE GLMQVSAEGS RLVQSYGSGK DAGEGAGVAT LERKVSSLRA SLRGLHEGRE NPDLAASLGS LAEQVQGLKV AMESAARPEE MLRRTADLSQ AAARAENLVD KAIEGRVGWM SRLEGAMLFV TFLGVVLAAF LLQWRVFRPL SMVEAYAREP NGERLALGRG VARGVAAMGA AVDDMHRDRD RALENAEREL EALRAEKRAL EEPLRRAEEQ ERMVAALMKG MKDAASRAGG VSEGVFGAVE EMNGWIERVN RGIEVHHSRM GQVSEAMDEM NVASVEVARN SGGAARSAES ARTLAGTGAD RVREALDAIS AMQRRVLELR DTMGELGHRA EAIGRIMDVI NDIADQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRKLAE KTMGATKEVG DAVQAMQSQA RTSIAGVEEV GRQMEGTAAA AEGAGGAMGE IVGVVEQTSM QVGAIATAAE QQAAGLESIS EAIGEISRVA GETAESMRQC TRALQGIGSR MEELDTVVQS MAEGRVGLAG GGDKLFEWDD ALNIGVADVD PQHKVLVDLI NEVYTAMKAG ADRSVLQDIV RRLREYTVKH FTYEEGVLHT SMRYPDMQAH LKQHRAFVER IAQFEEALGS GRVTLDMEMM RFLKNWLKQH IMGTDKKYVP YFNGDGTPK
|
| |