Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2720 |
Symbol | |
ID | 4662457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 3165167 |
End bp | 3167140 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820969 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_968158 |
Protein GI | 120603758 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.312815 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGT CCATTCTGCT GGTGGATGAC GAAGAAGGCA TCCGCAAGGT GCTCGGCATA ACGCTTGCCG ACGCCGGCTA CCGCGTCACC ACTGCCGCCG ACGGCGAAGA GGCAATGCGC CGCTTCGCCG AAGAAAGACC CGATATCGTC CTCACCGACA TCAAGATGCC GGGCATGTCC GGACTTGAAC TGCTTGAGAG CATCAAGTCG CGCGACAGCG AGGTCGAAGT CATCATGCTC ACCGGGCATG GCGACATGGA ACTCGCCATC CAGAGTCTCA AGCGCGACGC CACCGACTTC ATCACCAAGC CCATCAACGA CGACGTACTC GACATCGCAC TCGGACGTGC CCGAGAGCGC ATCACCATGC GCCGACGCCT GCGCGAATAC ACCGAGAATC TCGAGGACAT GGTCGCCAAG CAGTCTGCCC GTCTCGTGGC TGCCGAGAGG CAACTCGCCG CCTTGCAGGT CATGGACGGC ATCGCCTCCG GTGTGCAGAC CCTCTCGCGG ATGCTCGACC AGGCGGGCAT CTTCAACGAG CTTCCTTGCT TCGTCTCCAT GCACAGCCGC TATCTGGAAA TCGTGGCTAC CAACGACCTC TACAAGGAAC GCCTCGGACA CAAGGTGGGA CAACCCAGCT GGGAGGTCTA CAAGGGGCGC GAAGGCAGCG GCAACGGCTG TCCGGTCTGG AAGGTCATCG AGACGGGCGA AGGGCAGCGC AGCAACGAGA TACTCATCGA CAAGCACGGG CAGGAGATTC CCGTCATCGT GCATACGGCA CCCATTCTCG ACAACGACGG CGAAATCGAG ATGGTGCTCG AGATTTCCGT GGACGTCTCC GAAGTGCGCA GGTTGCAGGA CGAATTGCGC ATCACCCGCG AGCGCTATCG GCAGCTTTTC GACGAGGCCC CCTGCTACAT CGCCGTCATC GACCGTTCAC TCAAGGTCGT GGATGCCAAT CGACGCTTCC ACCATGACTT CGGCGAACCC GCCGCGCGCC ACTGCCATGA CATCTTCGCC CACCGTCTCG CCGCATGTCA GGGCTGCCCC GTCGAACGCA GTTTCGACGA CGGCAAACCC CACCAGTACG AGACGGTCGT CACCACGGGC GACGGCAGAC AGGCCAACGT GCTGGTCTGG ACCTCACCCC TGCGCGACGC TGCGGGCAAC ATCACCGAAG TGATGGAGAT GTCCACCGAC ATCACGCAAG TCCGCCAGTT GCAGGACAGG CTTTCACAGC TAGGGCTGCT GCTTGGTTCC ACGGCCCACG GTATCAAGGG GCTGCTCACC GCACTGGACG GCGGCGTGTA CCGCCTTGGC AGCGGGCTGG ATAGGAACGA CGAGGCGAGA GTCCGTGACA GTTTCGAGGA CATCCGTCAC CTGACCGGTC GCCTACGCAA GATGGTGCTC GACATCCTCT ACTACGCCAA GAAGCGCGAC CTCAACTGGG AAGTGGTGGT GGCAGAGCGC TTCGCCACCG AGACAGCCGA ACTCGTAGAG GGCAAGGCCG TCAACCGTGG CGTGGGTTTC CAGCTTGAGA TAGCAGCGGA ATCGGGCACG TTCGAGGCAG ACGCGGGAGC CCTTTCGGCA GCCCTTGTCA ACCTGCTTGA GAACGCCGTT GAAGCGTGTG CCGCCGAACG TTCCCGACCG GAACACTCGG TGACCTTCTC CGTGGGTGGA GACGCCAACC ATGTTGAATT CTCGGTACGT GACGACGGCG TCGGCATGGA CCGTGAAACC CGCGAGAAGC TCTTCACCCT GTTCTTCTCG TCCAAGGGGT CCGCTGGCAC GGGCATTGGC CTGTTCGTGG CCAATCAGGT CGTGCAGCAG CATGGCGGGC ATATCGCCGT GGCTTCTGAG CCCGGGCACG GTACGACATT CACCGTATCG TTGCCACGAC GCCTGCCGGA CGTCGCGCGT TGCCCAGCCC CACAGAACGG ACAACCCGAG GGTGACGAGG CGGACGACAA CTGA
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Protein sequence | MSESILLVDD EEGIRKVLGI TLADAGYRVT TAADGEEAMR RFAEERPDIV LTDIKMPGMS GLELLESIKS RDSEVEVIML TGHGDMELAI QSLKRDATDF ITKPINDDVL DIALGRARER ITMRRRLREY TENLEDMVAK QSARLVAAER QLAALQVMDG IASGVQTLSR MLDQAGIFNE LPCFVSMHSR YLEIVATNDL YKERLGHKVG QPSWEVYKGR EGSGNGCPVW KVIETGEGQR SNEILIDKHG QEIPVIVHTA PILDNDGEIE MVLEISVDVS EVRRLQDELR ITRERYRQLF DEAPCYIAVI DRSLKVVDAN RRFHHDFGEP AARHCHDIFA HRLAACQGCP VERSFDDGKP HQYETVVTTG DGRQANVLVW TSPLRDAAGN ITEVMEMSTD ITQVRQLQDR LSQLGLLLGS TAHGIKGLLT ALDGGVYRLG SGLDRNDEAR VRDSFEDIRH LTGRLRKMVL DILYYAKKRD LNWEVVVAER FATETAELVE GKAVNRGVGF QLEIAAESGT FEADAGALSA ALVNLLENAV EACAAERSRP EHSVTFSVGG DANHVEFSVR DDGVGMDRET REKLFTLFFS SKGSAGTGIG LFVANQVVQQ HGGHIAVASE PGHGTTFTVS LPRRLPDVAR CPAPQNGQPE GDEADDN
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