Gene Dvul_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2585 
Symbol 
ID4663973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3017332 
End bp3018435 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content44% 
IMG OID639820833 
Productnucleotidyl transferase 
Protein accessionYP_968027 
Protein GI120603627 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000196984 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAACAA AAAATGAAAT AAAATCATTT ATAATTTCCC ATAATGCCAC ACTGGCTCAA 
GGGTTAAACA AGCTTAATAG CAATGCAGGG GCGACACTTT TTGTCATCGA TGACGACAAT
AGATTAAGGG GCACGATGAC GGATGGAGAT GTACGCCGTG CGTTGCTACA AGGTGTTCGC
CTGGAAGATC CCATAAACCA GGCTATGCAC TCAGCCCCTT TTGTGACTCA TGTCAGTAGT
GCACTGGAGG AAAGGTTGCG CCTCATGCAC GCGCATGGAG TACGGCATCT CCCCGTAATA
GATGATTCAG GATTTTTGTT AGGGATTGAA ATGCTTCAAG GTTCTGTTTC TACAGCACTG
CTACCCAACA TAGCGGTTAT CATGTGTGGA GGGCTCGGGT CTCGCTTGGG TCATCTGACC
CACAATTGTC CCAAGCCTAT GTTGGAAGTA GGCGGAAAGC CTATTCTTGA ACGAATAATG
TGCAGCATCA TTCAAGCCGG TATCTCGCGT TTTTTCTTCG CTACACATTA TTTAAAAGAA
AAAATTGAAT GTTATTTCGG TAACGGGGAG AAGTGGGGGG TGCAGATTGA ATATTTAAAA
GAAAAGAAAC GGATGGGCAC AGGAGGGGCA CTCAGCCTGA TGCCTTATGT CCCCTCTCAC
CCTATGCTAA TCATGAACGG TGACATCCTA ACGGAATTCA ATATTCGCCA TCTTCTTGAC
TTCCACAGCA TGACTAACTC TATCGCCACC ATGGCCATTG CAGAATATTG CTATCAAAAT
CCTTATGGAG TTGTTCGACA TGAGGGAACG ATGTTATTGG ATATTGACGA AAAGCCTACG
AACTCATGGT TCATCAACGC AGGCATCTAT GTTGCAGAGC CAAGCCTGGT CGAAAAAGTC
CCCCAAGACA CCTTTATCGA TATGCCAACG CTTCTTCTTA ATGCGAAGAA AAAAGGCGAA
ACAATAAGTA TTTTTCCAAT ATGTGAAAAA TGGTTAGACA TAGGCCGAGA ACCTGACTAC
AGATCCGCGC AACGGATGAT TCAATGCTCG CAAACACCAA CGAAAACCAG AGAGGCATCA
TGCAATACAA AAGAATACTT GTAA
 
Protein sequence
MKTKNEIKSF IISHNATLAQ GLNKLNSNAG ATLFVIDDDN RLRGTMTDGD VRRALLQGVR 
LEDPINQAMH SAPFVTHVSS ALEERLRLMH AHGVRHLPVI DDSGFLLGIE MLQGSVSTAL
LPNIAVIMCG GLGSRLGHLT HNCPKPMLEV GGKPILERIM CSIIQAGISR FFFATHYLKE
KIECYFGNGE KWGVQIEYLK EKKRMGTGGA LSLMPYVPSH PMLIMNGDIL TEFNIRHLLD
FHSMTNSIAT MAIAEYCYQN PYGVVRHEGT MLLDIDEKPT NSWFINAGIY VAEPSLVEKV
PQDTFIDMPT LLLNAKKKGE TISIFPICEK WLDIGREPDY RSAQRMIQCS QTPTKTREAS
CNTKEYL