Gene Dvul_2584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2584 
Symbol 
ID4664261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp3014906 
End bp3016723 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content55% 
IMG OID639820832 
Productpolysaccharide export protein 
Protein accessionYP_968026 
Protein GI120603626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.40824e-05 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGATATGA AGAGTAAGCT TTTTCTTTCC ACAGTACTAC TACTGGCACT GGCCGCTCCC 
TCCTATGCGG CGGAGGTTTC ACCAACCACT TCCACCTCCT ATGGCAGCAG CATGGGTAAA
TCTGGCAATC CCAGCCCAAG CGGTAGTGGG GGCATTCAGG GCACACCTTC GACCCGACCT
CCGTCCTACC TGCCGAGCGG ATACCAAAAG GAAGCCCTCT ATCAGCAGGA AATCTATCGG
CAAGAGTTGC CCTCTCAGCG GGAAGAGCGG CAGCGCCAGT CCATACCGGG CCTACCCGCT
TGGGCGTTGG AGCGCTACCA TTCAGATAAG ACGCAAGGTC TGGAGCCCTT TGGGGCGAAC
CTGTTCCGGG GCAATTTCGC AGGCACGTAT GGTAACGGCA TGAACGATGA GTACGTCATT
CAGCCCGGCG ACAGAATCAC TGTACGAGTT TGGGGAGCGC GCAGTTATGA CGATGTGCTT
TTCGTTGACC AACAGGGCAA TATTTTCCTG CCTGAAATAG GGCCAGTGCG AGTGGCCGGG
CTGCTGCAGT CAGCACTCCT TAACACGGTG CGCGCCAAAC TGGCCTCGGT CTTCCCTGTA
AACGTCAACA TTTATGTAAA TCTGCAAAGT GCGCAACCCG TTGCCGTCTA TGTTGCTGGA
AACGTTCTCA ATCCTGGCCG CTACGCGGCT GGGCCGCAAG ATTCAGTCTT GTCCTACCTG
GACAGGGCCG GGGGCATTCT ACCCGAACAA GGCAGCTACC GAAATATCAG GATTCTGCGC
GATAAACAGA CTATCAGCAG CGTGGATCTC TACGACTACA TACTGAGGGG CGAACTGTCT
GCCATCCGCC TGAAAGATGG CGACACCATC CTAGTAGAAC CCTTCGGAGT GTCGGTGGCG
GCCTACGGCC TTTTGCGTCA GCCTGCCCGC TATGAATTCA GGGGGATGGC CAACGGCAAG
GAGCTTCTGA CCTACGCCAC CCCCCTCAAT GGAGTTTCGC ACGTCAGCGT CGGTGGCATC
CGCAACGACG AACCCTTCAA TGTTTATGTG ACCCTAAACG ATTTCCAAAA TATGCGTCTG
GAGGACGGGG ACCGAGTAGA ATTTGTGGCG GATACGCGGG GCAAAACCAT CATGGTATCT
GCGTCCGGGG CCATTCACGG TGCGTCACGT TTTCCTGTAC TCAAGCAAAC CAAGCTGAAG
ATGCTGCTGG AATACGTTGC GGTGGAACCG GAACTTGCTG CCATCAAATC CATATATATC
CGCCGCAAGA GTGTTGCCGC TGAACAAAAA GTAATTCTCA CGGATGCACT ACGCCGTCTT
GAACAAAGCG CGCTGACCGC CTCCTCTTCT TCTGTGGACG AGGCCGGTAT CCGAGTGAAG
GAAGCCGAAC TAATTCAGAG TTTTGTACAG CGAGCCTCTA AGATAGAGCC TGATGGTGTT
CTAGTCGTAT CTCGCGACGG CAAAATTTCC GATGTGCTGC TGGAGGAAGG AGACGAAATC
ATCATCCCCC GGCGGACGGA TGTAGTCCAC ATTTCCGGCG AAGTGCTCAT ACCTACCGCC
GTCACATGGG AAAAAGGTCA GAGTTTAAAA GATTATCTTA ATAGTGCGGG CGGTCTGTCC
GACCGCGCGG ACACAAACAA CATCCTGATC GTAGGTCTGA ACGGGGAAGT TTCCCGCGCC
AAAGGACAGG CCATCGAGCC CGGGGACCGC ATTTTGGTCA TGCCACAGTT TGATTCCAAG
AACCTGCAAC TGGTCAAGGA TGTGACCCAA GTGCTCTACC AGATGGCTGT AGCTGTTAAA
GTCGCAGTGG GGCTGTAG
 
Protein sequence
MDMKSKLFLS TVLLLALAAP SYAAEVSPTT STSYGSSMGK SGNPSPSGSG GIQGTPSTRP 
PSYLPSGYQK EALYQQEIYR QELPSQREER QRQSIPGLPA WALERYHSDK TQGLEPFGAN
LFRGNFAGTY GNGMNDEYVI QPGDRITVRV WGARSYDDVL FVDQQGNIFL PEIGPVRVAG
LLQSALLNTV RAKLASVFPV NVNIYVNLQS AQPVAVYVAG NVLNPGRYAA GPQDSVLSYL
DRAGGILPEQ GSYRNIRILR DKQTISSVDL YDYILRGELS AIRLKDGDTI LVEPFGVSVA
AYGLLRQPAR YEFRGMANGK ELLTYATPLN GVSHVSVGGI RNDEPFNVYV TLNDFQNMRL
EDGDRVEFVA DTRGKTIMVS ASGAIHGASR FPVLKQTKLK MLLEYVAVEP ELAAIKSIYI
RRKSVAAEQK VILTDALRRL EQSALTASSS SVDEAGIRVK EAELIQSFVQ RASKIEPDGV
LVVSRDGKIS DVLLEEGDEI IIPRRTDVVH ISGEVLIPTA VTWEKGQSLK DYLNSAGGLS
DRADTNNILI VGLNGEVSRA KGQAIEPGDR ILVMPQFDSK NLQLVKDVTQ VLYQMAVAVK
VAVGL