Gene Dvul_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2522 
Symbol 
ID4663658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2949201 
End bp2949866 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content62% 
IMG OID639820771 
ProductTrkA domain-containing protein 
Protein accessionYP_967965 
Protein GI120603565 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000136868 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0316786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAC CGAAACTCGA AATAGGCGTC ATCGGTCTTG GCAAGTTCGG CTTGCAGGTC 
TCACGGACCC TCGTCGAACT TGGGCATTCC GTGGTCGGCA TCGACAGTAC CGAGGGCCGC
ATCCGGCAGG CACAGGACAT CCTATCGCAG GTCTATCAGG GCAATGCCGC CGACCCCGCG
GTGTTGCAGC AACTGCGCTT CCAGGACCTC GACTGCGTCA TCGTCAGCGT CGGCAACTCC
ATGGAGACCT CGCTGCTTGT GACCCTCAAC CTGCAGGAAA TCGGCGTCCG CAAGATATGG
GTCAAGGCCG TGAGCACGGA ACACAAGAAG GTGCTCACAC GCCTTGGTGT CGATCACGTC
ATCCTTCCCG AACATGATGT GGCCACGCAC CTTGCCCACA GGCTCGTGAA TCCGGGAATG
CTCGACCTGC TGCCCCTCGG CGGCGGAGGG CAGATTCTCC TGCAGGAACT CACGGTGGAC
AAATGGGCCG GGCGGACGTT GCTCGACCTG AGACTCGCCA ACGAGCACGG CGTCATGGTG
GTGGCGGTGA AGCCCGCCGC CTTCCGCGAA TACCGCTTCG TACCCGCAGC CCACGAAGTG
CTGCAACAGG GTGACAAGCT TGTCGTCATC GGACGGCACG AAGACGTGCT CCGTCTCGAA
CCCTGA
 
Protein sequence
MATPKLEIGV IGLGKFGLQV SRTLVELGHS VVGIDSTEGR IRQAQDILSQ VYQGNAADPA 
VLQQLRFQDL DCVIVSVGNS METSLLVTLN LQEIGVRKIW VKAVSTEHKK VLTRLGVDHV
ILPEHDVATH LAHRLVNPGM LDLLPLGGGG QILLQELTVD KWAGRTLLDL RLANEHGVMV
VAVKPAAFRE YRFVPAAHEV LQQGDKLVVI GRHEDVLRLE P