Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2498 |
Symbol | |
ID | 4663445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2916296 |
End bp | 2919421 |
Gene Length | 3126 bp |
Protein Length | 1041 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639820747 |
Product | acriflavin resistance protein |
Protein accession | YP_967941 |
Protein GI | 120603541 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.10635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGTCA CGGAGTTCTT CATCCGCAGG CCGGTCACGA CCACCCTCGT CATGCTGGGG CTGCTCTTCT TCGGCGTGAT GGGCTACCGC CAGCTTCCGG TGAGCGACCT GCCCAACGTC GACTTCCCCA CCATACAGGT GCGGGCGCAA CTGCCGGGGG CGGACCCGGA GACCATGGCC TCGTCGGTGG CTGCCCCTCT GGAACGGCAA TTCGCCACCA TCGCGGGCAT CGACTCCATG AGTTCCACCA ACACGCAGGG CAACACGCGC ATCACCATCC AGTTCAACCT TTCGCGTGAC ATCGACGCGG CGGCGCAGGA CGTGCAAGCC GCCATATCGA CAGCGCAGCG CAAGCTGCCG TCAGACCTGA CCACGCCACC CAGCTACCAG AAGGTGAATC CGGCCGACCA GCCCATCCTC TTTCTCGCGC TCACATCGCC CACGCTTCCC CTCTCCAAGG TCAACGAATA CGCCGAGACG CGCATCGGGC AGACCATCTC CATGGTCTCG GGGGTGGCGC AGGTCAACGT CTACGGTGCC AAGAAGTACG CGGTGCGGGT GCAGGTCGAC CCGAGGCGGC TGAAGGCGCT GGGCCTCGGC ATCGACGAGG TGTCCGCCGC CGTGGACAAG GCCAACAGCA ACCTGCCCAC GGGCACCCTG CAAGGCGAAC ACACGGCGAG CATCATCAAG GCATCCGGGC AGTTGTACGA CGCTGCGGCC TACAGGCCCG TGGTGGTCGC CTACCGCAAC GGCGCGCCCG TGCGTCTCGA AGAGTTGGGC CGGGTCGTGG ATAGCGTTGA ACAGGACCGC ATCCTCAACT GGTTCAACGA CGAACGGGGC ATCGTGCTGG CCGTGCAACG CCAGCCCGGC ACCAACACGG TGGAGGTGGT CGAATCCATC AAGAGGCTGC TGCCTGAATT CGAGCGGCAG TTGCCTGCCG CCGTGAAGCT GAACATCCTG TTCGACCGGT CCGAGTCCAT CAAGGCGTCG GTGGCCGAGG TGAAGTTCAC GCTGGTGCTC ACGGTGTGCC TCGTGGTGCT GGTCATCTTT CTCTTTCTGC GCAGTCTTTC GGCCACCGTC ATTCCCAGTC TCGCGCTGCC CATGTCGGTG GTGGTGACCT TCGCCGCCAT GCACATGATG GGCTTCAGCC TCGACAACCT CTCTCTTATG GCCCTGACGC TGGCGGTGGG CTTCGTCGTG GACGACGCCA TCGTCATGCT GGAGAACATC GTGCGGCACA TGGAGATGGG CAAGACTCCG CTACGGGCCG CCCTCGACGG TGCGCGCGAG ATAGGCTTCA CCATCATATC CATGACGGTG TCCCTTGCGG CGGTGTTCAT CCCCGTACTG TTCATGGGGG GCATCGTGGG GCGGCTGTTC CACGAATTCG CGGTGGTCAT CACCGTCGCC ATCCTCCTTT CGGGCTTCGT CTCCCTGTCG CTCACGCCCA TGCTGTGCGC GCTGTTCCTC AAGCCGCATG TGGGGCAGAA ACGGCATGGG CGGGTGTACA ACGCGCTGGA GACCTTCTTC GAGACGCTGC ACCGGGGGTA TGAACGTTCG TTGCGGTTCA CGATGCGGCA CCACCGCATG ACGTTCGGCC TGTCGATGGT GGTGCTTGGT GTCACGGTGT GGCTTTTCGC CGCCATGCCC AAGGGCTTTC TGCCCAGTGA GGATACCGGG CAGATTTCCG GCTTCACCGA GGCCGACCAG TCCGTCTCCT TCGGGCAGAT GGTGAAGCTG CAGAAGACCC TGCACCCCAT CATCGCGGCT GACCCCGGCG TGGACTCGTT CTCGTCCACC GTGGGCGCGG GCGGTCCCAA CGTGGGCGGC AACTCCGGGC GTTTCTTCAT CAGGCTGAAG GATTTCGACG AGCGCGACGA GCATGTCGAC ACCATCATCA ACCGCCTGCG GGCCAAACTC TCCGGCTTTC CGGGCATCAA CGTCTTTCTC GTCAACCCGC CCAGTATCAA CGTGGGCGGA CGCGCTTCCA AGAGCCTCTA CCAGTACACA CTGCAAGGGC CTGACACCGC CGAACTGTAC AAGGCGGGAA CGGAACTTGA GGCGGTCCTG CGCGAGTTGC CCCAACTGCG CGACGTGACC AGCGACCTCC AGATACGCAA CCCCGAAGTG CGGGTGGACA TCGACCGTGA CAAGGCCGCC GCACTGGGCC TCAGCGTGCA TCAGGTGGAG GACGCCCTGC AATCGGCCTA CGGTACGCGG CAGGTCTCGA CCATCCTCGC ACCGGACAAC GACTATCAGG TCATCCTCGA ACTGTTGCCC GAATACCAGC GCGACGCGTC GTCGATGTCG TTGCTCAATG TGCGTTCCGC CAGCGGGCGT CTGGTGCCGC TGGATACCAT CGCCACCCTG CGCCCCTCGG TGGGGCCGCT GGCCGTGAAC CACTCCGGGC AATTCCCGTC CGTGACCCTG TCCTTCAACC TGCGCCCCGG CGTGTCCCTC AGTGAGGCGG TGCAGGCTGT GGAGGGCATC GCGGGGCAGT ATCTCCCGCC CACCGCCACC GGAACCTTCC AGGGCACGGC GCAGGCCTTC CAGTCGTCCA TGCAGGGCAT GGCGATGCTG CTGTTCATGG CGGTGGTGGT CATCTACATC GTGCTTGGCG TGCTGTACGA AAGCTTCATC CATCCGCTGA CCATCCTTTC CGGTCTGCCC TCGGCCGGAC TGGGGGCGCT GGTGACGCTG TTCATCTTCG GCATCGACCT CAACCTGTAC GCCTTCGTGG GCATCATCAT GCTCATCGGC ATCGTGAAGA AGAACGCCAT CATGATGATC GACTTCGCGG TGGAGGCCGA ACGCAAGAAC GGTGCAAGCC CTTATGAGGC CATCCTGCAG GGATGCCTCA TACGATTCCG GCCCATCATG ATGACGACCA TGGCCGCACT CATGGGCACG CTGCCCATCG CCGTGGGCTG GGGGCCGGGG GCCGAGGCCC GCCAGCCTCT TGGCCTCGCG GTGGTGGGCG GGCTGCTGGT CTCGCAGTTG CTCACACTGT ACATCACCCC CGTGTACTAC ACCTACCTCG ATGCCCTGAG TCGCCGCATC AAACGGCGCA TGGGGCGGGT GGCGCAGGAC GCCGAGGCCG TGGCCTCCGG TGGTGGCGGC GCATAG
|
Protein sequence | MNVTEFFIRR PVTTTLVMLG LLFFGVMGYR QLPVSDLPNV DFPTIQVRAQ LPGADPETMA SSVAAPLERQ FATIAGIDSM SSTNTQGNTR ITIQFNLSRD IDAAAQDVQA AISTAQRKLP SDLTTPPSYQ KVNPADQPIL FLALTSPTLP LSKVNEYAET RIGQTISMVS GVAQVNVYGA KKYAVRVQVD PRRLKALGLG IDEVSAAVDK ANSNLPTGTL QGEHTASIIK ASGQLYDAAA YRPVVVAYRN GAPVRLEELG RVVDSVEQDR ILNWFNDERG IVLAVQRQPG TNTVEVVESI KRLLPEFERQ LPAAVKLNIL FDRSESIKAS VAEVKFTLVL TVCLVVLVIF LFLRSLSATV IPSLALPMSV VVTFAAMHMM GFSLDNLSLM ALTLAVGFVV DDAIVMLENI VRHMEMGKTP LRAALDGARE IGFTIISMTV SLAAVFIPVL FMGGIVGRLF HEFAVVITVA ILLSGFVSLS LTPMLCALFL KPHVGQKRHG RVYNALETFF ETLHRGYERS LRFTMRHHRM TFGLSMVVLG VTVWLFAAMP KGFLPSEDTG QISGFTEADQ SVSFGQMVKL QKTLHPIIAA DPGVDSFSST VGAGGPNVGG NSGRFFIRLK DFDERDEHVD TIINRLRAKL SGFPGINVFL VNPPSINVGG RASKSLYQYT LQGPDTAELY KAGTELEAVL RELPQLRDVT SDLQIRNPEV RVDIDRDKAA ALGLSVHQVE DALQSAYGTR QVSTILAPDN DYQVILELLP EYQRDASSMS LLNVRSASGR LVPLDTIATL RPSVGPLAVN HSGQFPSVTL SFNLRPGVSL SEAVQAVEGI AGQYLPPTAT GTFQGTAQAF QSSMQGMAML LFMAVVVIYI VLGVLYESFI HPLTILSGLP SAGLGALVTL FIFGIDLNLY AFVGIIMLIG IVKKNAIMMI DFAVEAERKN GASPYEAILQ GCLIRFRPIM MTTMAALMGT LPIAVGWGPG AEARQPLGLA VVGGLLVSQL LTLYITPVYY TYLDALSRRI KRRMGRVAQD AEAVASGGGG A
|
| |