Gene Dvul_2498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2498 
Symbol 
ID4663445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2916296 
End bp2919421 
Gene Length3126 bp 
Protein Length1041 aa 
Translation table11 
GC content64% 
IMG OID639820747 
Productacriflavin resistance protein 
Protein accessionYP_967941 
Protein GI120603541 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.10635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTCA CGGAGTTCTT CATCCGCAGG CCGGTCACGA CCACCCTCGT CATGCTGGGG 
CTGCTCTTCT TCGGCGTGAT GGGCTACCGC CAGCTTCCGG TGAGCGACCT GCCCAACGTC
GACTTCCCCA CCATACAGGT GCGGGCGCAA CTGCCGGGGG CGGACCCGGA GACCATGGCC
TCGTCGGTGG CTGCCCCTCT GGAACGGCAA TTCGCCACCA TCGCGGGCAT CGACTCCATG
AGTTCCACCA ACACGCAGGG CAACACGCGC ATCACCATCC AGTTCAACCT TTCGCGTGAC
ATCGACGCGG CGGCGCAGGA CGTGCAAGCC GCCATATCGA CAGCGCAGCG CAAGCTGCCG
TCAGACCTGA CCACGCCACC CAGCTACCAG AAGGTGAATC CGGCCGACCA GCCCATCCTC
TTTCTCGCGC TCACATCGCC CACGCTTCCC CTCTCCAAGG TCAACGAATA CGCCGAGACG
CGCATCGGGC AGACCATCTC CATGGTCTCG GGGGTGGCGC AGGTCAACGT CTACGGTGCC
AAGAAGTACG CGGTGCGGGT GCAGGTCGAC CCGAGGCGGC TGAAGGCGCT GGGCCTCGGC
ATCGACGAGG TGTCCGCCGC CGTGGACAAG GCCAACAGCA ACCTGCCCAC GGGCACCCTG
CAAGGCGAAC ACACGGCGAG CATCATCAAG GCATCCGGGC AGTTGTACGA CGCTGCGGCC
TACAGGCCCG TGGTGGTCGC CTACCGCAAC GGCGCGCCCG TGCGTCTCGA AGAGTTGGGC
CGGGTCGTGG ATAGCGTTGA ACAGGACCGC ATCCTCAACT GGTTCAACGA CGAACGGGGC
ATCGTGCTGG CCGTGCAACG CCAGCCCGGC ACCAACACGG TGGAGGTGGT CGAATCCATC
AAGAGGCTGC TGCCTGAATT CGAGCGGCAG TTGCCTGCCG CCGTGAAGCT GAACATCCTG
TTCGACCGGT CCGAGTCCAT CAAGGCGTCG GTGGCCGAGG TGAAGTTCAC GCTGGTGCTC
ACGGTGTGCC TCGTGGTGCT GGTCATCTTT CTCTTTCTGC GCAGTCTTTC GGCCACCGTC
ATTCCCAGTC TCGCGCTGCC CATGTCGGTG GTGGTGACCT TCGCCGCCAT GCACATGATG
GGCTTCAGCC TCGACAACCT CTCTCTTATG GCCCTGACGC TGGCGGTGGG CTTCGTCGTG
GACGACGCCA TCGTCATGCT GGAGAACATC GTGCGGCACA TGGAGATGGG CAAGACTCCG
CTACGGGCCG CCCTCGACGG TGCGCGCGAG ATAGGCTTCA CCATCATATC CATGACGGTG
TCCCTTGCGG CGGTGTTCAT CCCCGTACTG TTCATGGGGG GCATCGTGGG GCGGCTGTTC
CACGAATTCG CGGTGGTCAT CACCGTCGCC ATCCTCCTTT CGGGCTTCGT CTCCCTGTCG
CTCACGCCCA TGCTGTGCGC GCTGTTCCTC AAGCCGCATG TGGGGCAGAA ACGGCATGGG
CGGGTGTACA ACGCGCTGGA GACCTTCTTC GAGACGCTGC ACCGGGGGTA TGAACGTTCG
TTGCGGTTCA CGATGCGGCA CCACCGCATG ACGTTCGGCC TGTCGATGGT GGTGCTTGGT
GTCACGGTGT GGCTTTTCGC CGCCATGCCC AAGGGCTTTC TGCCCAGTGA GGATACCGGG
CAGATTTCCG GCTTCACCGA GGCCGACCAG TCCGTCTCCT TCGGGCAGAT GGTGAAGCTG
CAGAAGACCC TGCACCCCAT CATCGCGGCT GACCCCGGCG TGGACTCGTT CTCGTCCACC
GTGGGCGCGG GCGGTCCCAA CGTGGGCGGC AACTCCGGGC GTTTCTTCAT CAGGCTGAAG
GATTTCGACG AGCGCGACGA GCATGTCGAC ACCATCATCA ACCGCCTGCG GGCCAAACTC
TCCGGCTTTC CGGGCATCAA CGTCTTTCTC GTCAACCCGC CCAGTATCAA CGTGGGCGGA
CGCGCTTCCA AGAGCCTCTA CCAGTACACA CTGCAAGGGC CTGACACCGC CGAACTGTAC
AAGGCGGGAA CGGAACTTGA GGCGGTCCTG CGCGAGTTGC CCCAACTGCG CGACGTGACC
AGCGACCTCC AGATACGCAA CCCCGAAGTG CGGGTGGACA TCGACCGTGA CAAGGCCGCC
GCACTGGGCC TCAGCGTGCA TCAGGTGGAG GACGCCCTGC AATCGGCCTA CGGTACGCGG
CAGGTCTCGA CCATCCTCGC ACCGGACAAC GACTATCAGG TCATCCTCGA ACTGTTGCCC
GAATACCAGC GCGACGCGTC GTCGATGTCG TTGCTCAATG TGCGTTCCGC CAGCGGGCGT
CTGGTGCCGC TGGATACCAT CGCCACCCTG CGCCCCTCGG TGGGGCCGCT GGCCGTGAAC
CACTCCGGGC AATTCCCGTC CGTGACCCTG TCCTTCAACC TGCGCCCCGG CGTGTCCCTC
AGTGAGGCGG TGCAGGCTGT GGAGGGCATC GCGGGGCAGT ATCTCCCGCC CACCGCCACC
GGAACCTTCC AGGGCACGGC GCAGGCCTTC CAGTCGTCCA TGCAGGGCAT GGCGATGCTG
CTGTTCATGG CGGTGGTGGT CATCTACATC GTGCTTGGCG TGCTGTACGA AAGCTTCATC
CATCCGCTGA CCATCCTTTC CGGTCTGCCC TCGGCCGGAC TGGGGGCGCT GGTGACGCTG
TTCATCTTCG GCATCGACCT CAACCTGTAC GCCTTCGTGG GCATCATCAT GCTCATCGGC
ATCGTGAAGA AGAACGCCAT CATGATGATC GACTTCGCGG TGGAGGCCGA ACGCAAGAAC
GGTGCAAGCC CTTATGAGGC CATCCTGCAG GGATGCCTCA TACGATTCCG GCCCATCATG
ATGACGACCA TGGCCGCACT CATGGGCACG CTGCCCATCG CCGTGGGCTG GGGGCCGGGG
GCCGAGGCCC GCCAGCCTCT TGGCCTCGCG GTGGTGGGCG GGCTGCTGGT CTCGCAGTTG
CTCACACTGT ACATCACCCC CGTGTACTAC ACCTACCTCG ATGCCCTGAG TCGCCGCATC
AAACGGCGCA TGGGGCGGGT GGCGCAGGAC GCCGAGGCCG TGGCCTCCGG TGGTGGCGGC
GCATAG
 
Protein sequence
MNVTEFFIRR PVTTTLVMLG LLFFGVMGYR QLPVSDLPNV DFPTIQVRAQ LPGADPETMA 
SSVAAPLERQ FATIAGIDSM SSTNTQGNTR ITIQFNLSRD IDAAAQDVQA AISTAQRKLP
SDLTTPPSYQ KVNPADQPIL FLALTSPTLP LSKVNEYAET RIGQTISMVS GVAQVNVYGA
KKYAVRVQVD PRRLKALGLG IDEVSAAVDK ANSNLPTGTL QGEHTASIIK ASGQLYDAAA
YRPVVVAYRN GAPVRLEELG RVVDSVEQDR ILNWFNDERG IVLAVQRQPG TNTVEVVESI
KRLLPEFERQ LPAAVKLNIL FDRSESIKAS VAEVKFTLVL TVCLVVLVIF LFLRSLSATV
IPSLALPMSV VVTFAAMHMM GFSLDNLSLM ALTLAVGFVV DDAIVMLENI VRHMEMGKTP
LRAALDGARE IGFTIISMTV SLAAVFIPVL FMGGIVGRLF HEFAVVITVA ILLSGFVSLS
LTPMLCALFL KPHVGQKRHG RVYNALETFF ETLHRGYERS LRFTMRHHRM TFGLSMVVLG
VTVWLFAAMP KGFLPSEDTG QISGFTEADQ SVSFGQMVKL QKTLHPIIAA DPGVDSFSST
VGAGGPNVGG NSGRFFIRLK DFDERDEHVD TIINRLRAKL SGFPGINVFL VNPPSINVGG
RASKSLYQYT LQGPDTAELY KAGTELEAVL RELPQLRDVT SDLQIRNPEV RVDIDRDKAA
ALGLSVHQVE DALQSAYGTR QVSTILAPDN DYQVILELLP EYQRDASSMS LLNVRSASGR
LVPLDTIATL RPSVGPLAVN HSGQFPSVTL SFNLRPGVSL SEAVQAVEGI AGQYLPPTAT
GTFQGTAQAF QSSMQGMAML LFMAVVVIYI VLGVLYESFI HPLTILSGLP SAGLGALVTL
FIFGIDLNLY AFVGIIMLIG IVKKNAIMMI DFAVEAERKN GASPYEAILQ GCLIRFRPIM
MTTMAALMGT LPIAVGWGPG AEARQPLGLA VVGGLLVSQL LTLYITPVYY TYLDALSRRI
KRRMGRVAQD AEAVASGGGG A