| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2490 |
|---|
| Symbol | |
|---|
| ID | 4663450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2904114 |
|---|
| End bp | 2905661 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639820739 |
|---|
| Product | SSS family solute/sodium (Na+) symporter |
|---|
| Protein accession | YP_967933 |
|---|
| Protein GI | 120603533 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGT TCACCAGCAC TCTCGGACAG CCCAACGCCG TCTCCATCCT CTTCTTCTTC
GCCTTCGTCG CCTTCACGTT GGCCATCACG TGGTTCGCGG CACGCCGCAG CCGTTCGGCC
TCGGAATTCT ATGCGGCGGG GCGTAGCGTC ACCGGACTGC AGAACGGCCT CGCCCTCGCG
GGCGACTACA TGAGTGCGGC CTCGTTTCTC GGCATCGCCG GACTGGTGTC GCTGAAGGGG
TACGACGGCC TCATCTACTC CATCGGCTTT CTCGTGGGCT GGCCGCTCAT GATGTTCCTC
ATCGCCGAAC CCCTGCGCAA TCTCGGCCGG TACACCTTCG CGGATGTCGT GGCCTACAGG
CTGCGGCAGA AGCCCATACG CATCGCTGCC GCGTGCGGGT CGCTGATGAC GGTGTGCTTC
TACCTCATCG CCCAGATGGT GGGGTCGGGA GCACTGGTGC AGCTCATGTT CGGCATCCGC
TACGAATACG CCGTGGTGGC CGTGGGCTTC ATCATGATGG CCTATGTGCT CTTCGGCGGC
ATGCTGGCCA CGACATGGGT GCAGATAACC AAGGCGGTGC TGCTCCTTGG CGGTGCCACG
GCCATGGTGG TGATGGTTCT CGCGCAGTTC GACTACAGCC CCACCCGCCT TTTCGTGACC
GCAGCCGCGA AGCACGGCGA GGCGATGCTG GCCCCCGGCG GCCTCGTGTC CAACCCGTGG
GACGCCATCT CGCTGGGCAT GGCACTCATG TTCGGCACGG CAGGGCTTCC GCACATCCTC
ATGCGCTTCT ACACGGTGCC CGACGCCCGC GCCGCCCGTA AATCGGTATT CTATGCCACC
AGTCTCATCT CGTACTTCTA CGTGCTCACC TTCATCATCG GCTTCGGTGC CATGATGCTT
GTCGGCCCCG ACGCCATCCG CATGTTCGAC AAGGGCGGCA ACATGGCGGC CCCGCTGCTG
GCGGAAGTGA CAGGTGGCAC CATGTTCCTC GGCTTCATCG CCGCCGTCGC CTTCGCCACC
ATCCTCGCCG TGGTCGCGGG TCTGACGCTG GCAGGGGCGA CGACCTTCTC CCACGACCTC
TACGCCAATG TCTTCAAGGG CGGACAGTCG AACGAGGCGG ATGAGGTCCG CGTGGCCAAA
CGCGCCACCA TCGCCCTCGG CGTCATCGCC ATGCTGCTGG GCATCGCCTT CAAGGGACAG
AACGTGGCCT TCATGGTCGG ACTGGCCTTC GCCATCGCCG CCAGTGCCAA CCTGCCCGCA
CTCCTCCTGT CCATCATGTG GCGCGGCTGC AGCACCACCG GCGCAGTGTG GGCCATTGTC
ACCGGGGGCG TTCTCGCCGT GGGCCTCATC ATCGTCAGCC CCACCGTCTG GACGGATGTG
TTCCACCTCG GCACGGCCCC CTTCCCGCTC AAGAACCCGG CCCTGCTTTC CATGCCCGCC
GCGTTCATGG CCGGAATCGC CGGGTCGCTG TTGCGCCCCG ACAGTGAGGA GTCCGCCCGC
TTCGACGCCC AGAAGATTCG CAACTACCTC GGCGTAGGCG CGGAGTGA
|
|---|
| Protein sequence | MPEFTSTLGQ PNAVSILFFF AFVAFTLAIT WFAARRSRSA SEFYAAGRSV TGLQNGLALA
GDYMSAASFL GIAGLVSLKG YDGLIYSIGF LVGWPLMMFL IAEPLRNLGR YTFADVVAYR
LRQKPIRIAA ACGSLMTVCF YLIAQMVGSG ALVQLMFGIR YEYAVVAVGF IMMAYVLFGG
MLATTWVQIT KAVLLLGGAT AMVVMVLAQF DYSPTRLFVT AAAKHGEAML APGGLVSNPW
DAISLGMALM FGTAGLPHIL MRFYTVPDAR AARKSVFYAT SLISYFYVLT FIIGFGAMML
VGPDAIRMFD KGGNMAAPLL AEVTGGTMFL GFIAAVAFAT ILAVVAGLTL AGATTFSHDL
YANVFKGGQS NEADEVRVAK RATIALGVIA MLLGIAFKGQ NVAFMVGLAF AIAASANLPA
LLLSIMWRGC STTGAVWAIV TGGVLAVGLI IVSPTVWTDV FHLGTAPFPL KNPALLSMPA
AFMAGIAGSL LRPDSEESAR FDAQKIRNYL GVGAE
|
|---|
| |