| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2483 |
|---|
| Symbol | |
|---|
| ID | 4662278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2888954 |
|---|
| End bp | 2892337 |
|---|
| Gene Length | 3384 bp |
|---|
| Protein Length | 1127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639820731 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_967926 |
|---|
| Protein GI | 120603526 |
|---|
| COG category | [L] Replication, recombination and repair
[S] Function unknown |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases
[COG1379] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00375] conserved hypothetical protein TIGR00375 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGT TTAGAGCCGA CCTTCATATC CATTCGCGCT TCTCAAGGGC CACCAGCAGC
CGCCTCAACG CCCGGCATCT GGCGGCGTGG GCCGCCGTGA AAGGGATCGA TGTGCTGGGT
ACCGGCGACT TCACCCACCC GCAGTGGCTT GCTGAACTTC GAGAGCAACT CGTGCGTGAC
GACGCTTCGG GCCTCTACAG GCTGCGTGAC CCGCGCGGAC TCTCCGACGA ACTGCCCGCC
TTCGCCGACA GGGTGAAGCA GTCGCGGTGC CTGTTCGTGC CGCAGGCCGA GATAAGCTCC
ATCTACAAGC GTGGCGGCAA GGTGCGGAAG GTGCACAACA TCGTGTACAT GCCCGACTTC
GACGCCGTGG ACCGCCTCAA TCGCAAGCTT GCCGAGGTGG GCAACCTCGT GTCGGACGGG
CGGCCCATCC TCGGGCTGGA TGCCCGCGAC TTGCTGGGCA TGGTGCTCGA TGCCGACCCG
CGCGGGGTTC TCGTGCCCGC CCATATCTGG ACGCCATGGT TCGCCGTGTT CGGTTCCAAG
TCGGGCTTCG ACACCCTCGA CGATTGCTTC GGCGACCTCA CGGGCGAGAT TTTCGCTCTT
GAGACGGGGC TCTCGTCCGA CCCGGAGATG AACTGGCTGT GGAGTCATCT CGACCGTTTC
GCGCTCATCT CCAACTCGGA CGCCCATTCC GGCGACAATC TCGGGCGCGA GGCCAACCTC
TTCGAAGGCG AGATGTCGTA CGACGGCATC TTCCGCAGTC TGCGCGGTGA CGCCGTGGAT
TGCCGCTTTC TCGGAACGCT GGAGTTCTTT CCCGAAGAGG GCAAGTACCA CCTCGACGGG
CATCGCGCCT GCAATGTGGT GTACGAACCG CGCGAGACTG TGGCGCGTGG CGGCCTGTGC
CCTGTGTGCG GCAAGCCGCT GACGGTGGGG GTGCTTCACC GTGTGCTCGA ACTCGCCGAC
CGCGACACCC CTGAACAGGT GGCGGGGCGG CAGGGCTTCC GGTCGCTGAT ACCGTTGCCC
GAGATCCTCG GCGAGATTCT GGGGGTGGGG GCCAAGAGTC GCAAGGTCGC AGAATGGACG
GGTCGACTGG TGCAGCGCTT CGGGCCTGAA CTCGCCATCC TGCAGGATGT GTCGCTGGAC
GCCCTGCGCC GTTACTGGGA ACCGCTGGGC GAGGGCATCG CCCGGATGCG CCGTGGCGAG
GTGCTGCGAC AGGGCGGCTA CGATGGCGAG TATGGCGTGG TGCGTGTGTT CACCGAACGG
GAACGGGCGT CGCTGCGCGG TGGCGGCGGG TCGAAGGCCG CGCTTCCGTT GCTCGACCTC
GGAGGGGCGG CACCCGCACC GGCCGTGCAT GACACTCCGG GCCGGAAGAA TACCGGGACG
AAGGATGCGG GCGCCGGGGG CATCATCTCA CCCGCTGTCG CAGGGGCGGA CGTGGCGACG
TCTGCGAAGG CGTCCGGCGG CAGGGCCGCA AGCGCATCTG AAGCCGGGGG CGCGAACGCG
TCTGCCGAGA CGACCACCCC GCACGATACC ACTGCCGCCC GGCAGACCTC CGCAGATGGC
GGGGGAGAGG GACCGGGACT GGCTTCGCTC TTCATTTCAG CGCGTCCGGC AGAACCGCCT
GTGGATTTCA ATCCGGAACA GCGTTCCGCC ATCGCAGGCG GGCCGGGGCC GGTACTGGTG
CTGGCAGGTC CCGGCACGGG CAAGACCCGT ACGCTGGTGG GGCGTGTGCA GCGGCTTGTC
GCCGAGGGTG TCGCCGCACG GCGCATCGTG GCTGTCACAT TCACACGGCG TGCCGCCACG
GAGATGGACG AACGCCTGTC CGTCACACTG GGCGACGGTG CACCGTTGCC ACGTACCGAC
ACGCTTCATG CCCTGGCCTT CGAGTTCTGG CATCGGTCAT CGGCGCAGCC GCCCGTGCTC
CTTTCGGAAG AGGCCGCCCG CCGGGTCTTT GCCGAGGCCA ACCCCGACGC CACGGCACAG
ACGCTACGCG AGGCATGGGA CGAACTGGCC GTGTGCCGCG AGCGCATGCA GGTGTGTTCG
CTTGCGCTGG CCCCTCTTCT CGACCGCTAT GTCCAGCAGA AGGCCGCGTG GAATCTCGCC
GACTATACGG ATTTGCTGGA ATTCTGGCTT GAACAGATAC ACAACGGCCT CTATGTGCCC
CCGTGGCGTC ATGTGCTGGT GGACGAGATA CAGGACCTCT CGCCGCTGCA ACTCGCCCTT
GTGCGTGCCT TGCTGCCGCC GGGAGGCGAA GGGTTCTTCG GCATCGGCGA CCCCGACCAG
TCAATCTACG GTTTCAGGGG GGCGCACGGC GACGTGAAGG GGGCACTGGA TGAGGCATGG
CCGGGCCTCT CGGTGGTGAC GCTTCGCGCC AACTACCGTT CGTCGGCGAG CGTACTCGAT
GCCGCCGGGG CACTCATGGA GGGACGTTCG GCGTGCGGGC GTCTGCGGGC CGTACGTGAC
CTGCCCGCCG ACATCAGACT GTTCGAGGCC CCGTCCGCAG AGAGTGAGGC CGCATGGATA
GGCGACCGGA TACGGTCGCT CATCGGGTCC ACGGCGCATA CGCTGGTGGA TGCCGCACCT
GAGGGTGCGC TACCCGGAGA GGGAACGTTC GGCCCCGGCG ACATCGCGGT GCTGGTGCGG
GTGCGTGCGC TCATTCCCGT GCTGCAACGC ACGTTGTCGC GGCTTGGCGT GCCCGTGGCA
GCCCCTGAGA CGGAGGCCTT CTGGGCCGAC CAGCGGGTCT CTCTCATCCT CGCCGCCGCC
GGACGTTTCG TGGGTATCGG CAGTGCGGTC GCCGGAGGGC CCGGCGACGA GGTGAATTGT
CCTGACAAGA TGCTGGCGCG TGGCCCGCTG GGCGTTGCGG CCTACCTGCG CGAGTCGCCC
CCCTTCGATG AACTGTTCTG GCAATCCGCG GCATTCAAGG CGTTGAGCAA GGCGTATGAC
ACGCACGGGG GATGGGTGGG GCTCATCAAC TGGGTGAATC TGCAAAGCGA ACTCGAGACC
GTGCGCAGGC GTAGCGAGAA GGTGCAGGTC ATGAGCCTTC ATGCCGCCAA GGGGCTCGAA
TTCCGTGCCG TGTTCCTGCC CGCGCTGGAA GACGGCATAC TGCCCTTCGC CGGGGCGGCG
ACGCTTTCAG GACACGCCGA CCGGGAACAC ATGCGCACCG ACCTTGAGGA GGAACGCCGC
CTGTTCTACG TGGGTATCAC CCGTGCGGCA GAGGGCCTCT ACCTCAGCCG GGCGTCGCGT
CGCACCCTCT ACGGGCGCGA GGTGCGTCTC AAGGCGTCGC GTTTTCTCGA TGATGTGCCG
GTGGCGGGGG TCAAGCGTTC AGCGCTGGTG CGTCACAGCA AGCATAGCGT GAAGCAGTTG
AGTCTGCTTG GGGGCGGCGA CTGA
|
|---|
| Protein sequence | MQQFRADLHI HSRFSRATSS RLNARHLAAW AAVKGIDVLG TGDFTHPQWL AELREQLVRD
DASGLYRLRD PRGLSDELPA FADRVKQSRC LFVPQAEISS IYKRGGKVRK VHNIVYMPDF
DAVDRLNRKL AEVGNLVSDG RPILGLDARD LLGMVLDADP RGVLVPAHIW TPWFAVFGSK
SGFDTLDDCF GDLTGEIFAL ETGLSSDPEM NWLWSHLDRF ALISNSDAHS GDNLGREANL
FEGEMSYDGI FRSLRGDAVD CRFLGTLEFF PEEGKYHLDG HRACNVVYEP RETVARGGLC
PVCGKPLTVG VLHRVLELAD RDTPEQVAGR QGFRSLIPLP EILGEILGVG AKSRKVAEWT
GRLVQRFGPE LAILQDVSLD ALRRYWEPLG EGIARMRRGE VLRQGGYDGE YGVVRVFTER
ERASLRGGGG SKAALPLLDL GGAAPAPAVH DTPGRKNTGT KDAGAGGIIS PAVAGADVAT
SAKASGGRAA SASEAGGANA SAETTTPHDT TAARQTSADG GGEGPGLASL FISARPAEPP
VDFNPEQRSA IAGGPGPVLV LAGPGTGKTR TLVGRVQRLV AEGVAARRIV AVTFTRRAAT
EMDERLSVTL GDGAPLPRTD TLHALAFEFW HRSSAQPPVL LSEEAARRVF AEANPDATAQ
TLREAWDELA VCRERMQVCS LALAPLLDRY VQQKAAWNLA DYTDLLEFWL EQIHNGLYVP
PWRHVLVDEI QDLSPLQLAL VRALLPPGGE GFFGIGDPDQ SIYGFRGAHG DVKGALDEAW
PGLSVVTLRA NYRSSASVLD AAGALMEGRS ACGRLRAVRD LPADIRLFEA PSAESEAAWI
GDRIRSLIGS TAHTLVDAAP EGALPGEGTF GPGDIAVLVR VRALIPVLQR TLSRLGVPVA
APETEAFWAD QRVSLILAAA GRFVGIGSAV AGGPGDEVNC PDKMLARGPL GVAAYLRESP
PFDELFWQSA AFKALSKAYD THGGWVGLIN WVNLQSELET VRRRSEKVQV MSLHAAKGLE
FRAVFLPALE DGILPFAGAA TLSGHADREH MRTDLEEERR LFYVGITRAA EGLYLSRASR
RTLYGREVRL KASRFLDDVP VAGVKRSALV RHSKHSVKQL SLLGGGD
|
|---|
| |